Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 54.62 | 52.55 |
| Os02t0719800-02 | Rice | plasma membrane | 50.43 | 48.23 |
| VIT_10s0003g02670.t01 | Wine grape | nucleus | 52.28 | 47.96 |
| KRH12823 | Soybean | nucleus | 50.68 | 47.68 |
| KRH37781 | Soybean | nucleus | 50.06 | 47.1 |
| GSMUA_Achr6P13670_001 | Banana | nucleus | 35.76 | 46.93 |
| PGSC0003DMT400007982 | Potato | nucleus | 46.98 | 44.77 |
| Solyc02g071270.1.1 | Tomato | extracellular | 45.01 | 43.09 |
| GSMUA_Achr4P31220_001 | Banana | plastid | 45.99 | 41.44 |
| Os02t0517531-01 | Rice | nucleus, plasma membrane | 39.95 | 32.37 |
| GSMUA_Achr6P13690_001 | Banana | golgi, plasma membrane | 52.9 | 31.2 |
| GSMUA_Achr3P03100_001 | Banana | nucleus | 50.8 | 31.02 |
| GSMUA_Achr2P20130_001 | Banana | nucleus | 46.61 | 30.78 |
| Os05t0102800-01 | Rice | nucleus | 32.68 | 27.75 |
| Os01t0907900-01 | Rice | nucleus | 16.77 | 19.91 |
| Os09t0531200-01 | Rice | cytosol | 7.64 | 19.2 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 6.66 | 13.88 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EntrezGene:4329159 | EMBL:AB244280 | ProteinID:BAD28947.1 | ProteinID:BAF08593.1 |
| ProteinID:BAS78366.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 |
| InterPro:IPR012677 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | EnsemblPlantsGene:Os02g0319100 |
| EnsemblPlants:Os02t0319100-01 | PFAM:PF00076 | PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF4 |
| UniProt:Q6EQX3 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI00003CE85A |
| RefSeq:XP_015625467.1 | SEG:seg | : | : | : | : |
Description
ML5Nucleotide-binding, alpha-beta plait domain containing protein. (Os02t0319100-01)
Coordinates
chr2:+:12720938..12728873
Molecular Weight (calculated)
90300.2 Da
IEP (calculated)
6.737
GRAVY (calculated)
-0.641
Length
811 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQREDHTKS SEPAFIPSKR THQMRNIWAW GGPSSTTVNG SSDAVLFSSS LPSVLQFGKL PGKEREYNAQ PKDDMFPMMK QPGTNARVAD PMDDVAQHLI
101: GNLLPDDEEL LAGVIEDFDH VKLRTQVEES EEYDVFRNSG GMELDIDPLE SITFGTAKAS LVNGTGSSTN QYSIQNGAGT VTGEHPYGEH PSRTLFVRNI
201: NSNVEDSELR SLFEPFGDIR SMYTATKHRG FVMISYYDIR HARNAKTALQ SKPLRRRKLD IHYSIPKENP SDKDMNQGTL VIFNLEPAVS NEELLQIFGA
301: FGEVREIRET PHKRHHRFIE FYDVRAAESA LRSLNKSDIA GKRVKLEPSR PGGARRSFIQ HFNHEFEQDE TKHNSFQIGS PSANSPPSLW SQLGSPTDEN
401: KLNALNETAF NGGMSPLGSN HLSGFSSGYP PMKSPVGKSS YWNNRADNIF HGSPTLHNSH SFPEHHGGII SASPLVSSAA SSASTASGFT ALTGTSFLWG
501: NNNNLRDHGQ PSSIQSQALS NSLFPNNQPQ RQSNLYQNLR GSFGASEHFS QFNVGSAPSV FPFESNFGYF SDSPDTSYMR QGKFGGTGPT RVSGSLMTNF
601: GAYPRINVAS MQNGSVGFEG LLDRGRNQTV GNSGCQEDSR VQYQLDLEKI IAGKDTRTTL MIKNIPNKYT SNMLLEVIDE THEGTYDFFY LPIDFKNKCN
701: VGYAFINMAS PGYIVSFFKA FAGRKWEKFN SEKVVSLAYA RIQGKAALVN HFQNSSLMNE DKRCRPMLFD PKHTENNNQI LLNGIFISMA QQDATQERHD
801: LPENPREDNF S
101: GNLLPDDEEL LAGVIEDFDH VKLRTQVEES EEYDVFRNSG GMELDIDPLE SITFGTAKAS LVNGTGSSTN QYSIQNGAGT VTGEHPYGEH PSRTLFVRNI
201: NSNVEDSELR SLFEPFGDIR SMYTATKHRG FVMISYYDIR HARNAKTALQ SKPLRRRKLD IHYSIPKENP SDKDMNQGTL VIFNLEPAVS NEELLQIFGA
301: FGEVREIRET PHKRHHRFIE FYDVRAAESA LRSLNKSDIA GKRVKLEPSR PGGARRSFIQ HFNHEFEQDE TKHNSFQIGS PSANSPPSLW SQLGSPTDEN
401: KLNALNETAF NGGMSPLGSN HLSGFSSGYP PMKSPVGKSS YWNNRADNIF HGSPTLHNSH SFPEHHGGII SASPLVSSAA SSASTASGFT ALTGTSFLWG
501: NNNNLRDHGQ PSSIQSQALS NSLFPNNQPQ RQSNLYQNLR GSFGASEHFS QFNVGSAPSV FPFESNFGYF SDSPDTSYMR QGKFGGTGPT RVSGSLMTNF
601: GAYPRINVAS MQNGSVGFEG LLDRGRNQTV GNSGCQEDSR VQYQLDLEKI IAGKDTRTTL MIKNIPNKYT SNMLLEVIDE THEGTYDFFY LPIDFKNKCN
701: VGYAFINMAS PGYIVSFFKA FAGRKWEKFN SEKVVSLAYA RIQGKAALVN HFQNSSLMNE DKRCRPMLFD PKHTENNNQI LLNGIFISMA QQDATQERHD
801: LPENPREDNF S
001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
Arabidopsis Description
ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.