Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G017320.1 | Barley | plastid | 58.82 | 50.0 |
| HORVU2Hr1G123290.3 | Barley | extracellular | 77.12 | 49.58 |
| HORVU5Hr1G072670.2 | Barley | cytosol | 58.82 | 46.15 |
| HORVU0Hr1G018980.1 | Barley | cytosol, mitochondrion | 55.56 | 43.59 |
| HORVU3Hr1G113050.1 | Barley | cytosol, mitochondrion, nucleus | 79.74 | 33.42 |
| Zm00001d036468_P001 | Maize | nucleus | 39.22 | 28.04 |
| Zm00001d036465_P001 | Maize | nucleus | 39.22 | 28.04 |
| EER90325 | Sorghum | cytosol, mitochondrion | 41.83 | 26.56 |
| GSMUA_Achr3P17090_001 | Banana | cytosol | 24.84 | 18.63 |
| GSMUA_Achr6P28320_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 22.88 | 17.07 |
| PGSC0003DMT400017820 | Potato | cytosol | 13.73 | 16.94 |
| VIT_14s0219g00110.t01 | Wine grape | nucleus | 21.57 | 15.14 |
| Solyc02g093710.1.1 | Tomato | mitochondrion | 16.99 | 13.61 |
| PGSC0003DMT400032865 | Potato | cytosol | 15.69 | 12.5 |
| Solyc02g067940.1.1 | Tomato | cytosol, plastid | 7.84 | 12.5 |
| Bra025553.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 16.99 | 11.5 |
| AT5G40690.1 | Thale cress | plastid | 15.69 | 11.43 |
| KRH72087 | Soybean | plastid | 11.11 | 10.06 |
| CDY36373 | Canola | cytosol, mitochondrion, nucleus, plastid | 13.73 | 9.86 |
| CDY42559 | Canola | cytosol | 13.07 | 9.39 |
| KRG88946 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 3.27 | 5.15 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G000630.1 | EnsemblPlantsGene:HORVU4Hr1G000630 | PANTHER:PTHR34278 | PANTHER:PTHR34278:SF1 | SEG:seg | UniParc:UPI000B47541D |
| UniProt:A0A287MW35 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:1116900..1117876
Molecular Weight (calculated)
16246.2 Da
IEP (calculated)
3.718
GRAVY (calculated)
-0.391
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: KGARKLRAAD VALNHRLVSW RVGGGTEDGP VATGGYNYRG ASTSAVLAHL AGGNNWHAED KEEDDANLVA AALRGISDLY DLIVGLQAAP DGQEDDADGT
101: TAAADTDEIE EQDAEITDVV DEDEEEDDDG FCVVRGITIA LEFSDVEEDW IVV
101: TAAADTDEIE EQDAEITDVV DEDEEEDDDG FCVVRGITIA LEFSDVEEDW IVV
0001: MAVSEQSQDV FPWLKSLPVA PEFRPTLAEF QDPIAYILKI EEEASRYGIC KILPPLPPPS KKTSISNLNR SLAARAAARV RDGGFGACDY DGGPTFATRQ
0101: QQIGFCPRKQ RPVQRPVWQS GEEYSFGEFE FKAKNFEKNY LKKCGKKSQL SALEIETLYW RATVDKPFSV EYANDMPGSA FIPLSLAAAR RRESGGEGGT
0201: VGETAWNMRA MSRAEGSLLK FMKEEIPGVT SPMVYVAMMF SWFAWHVEDH DLHSLNYLHM GAGKTWYGVP KDAALAFEEV VRVHGYGEEL NPLVTFSTLG
0301: EKTTVMSPEV FVKAGIPCCR LVQNPGEFVV TFPGAYHSGF SHGFNFGEAS NIATPEWLRM AKDAAIRRAA INYPPMVSHL QLLYDFVLAL GSRVPTSINP
0401: KPRSSRLKDK ARSEGERLTK KLFVQNIIHN NELLSSLGKG SPVALLPQSS SDISVCSDLR IGSHLITNQE NPIQLKCEDL SSDSVVVDLS NGLKDTVSVK
0501: EKFTSLCERS RNHLASTEKD TQETLSDAER RKNDAAVALS DQRLFSCVTC GVLSFDCVAI VQPKEAAARY LMSADCSFFN DWTAASGSAN LGQAARSLHP
0601: QSKEKHDVNY FYNVPVQTMD HSVKTGDQKT STTSPTIAHK DNDVLGMLAS AYGDSSDSEE EDQKGLVTPS SKGETKTYDQ EGSDGHEEAR DGRTSDFNCQ
0701: RLTSEQNGLS KGGKSSLLEI ALPFIPRSDD DSCRLHVFCL EHAAEVEQQL RPFGGINLML LCHPEYPRIE AEAKIVAEEL VINHEWNDTE FRNVTREDEE
0801: TIQAALDNVE AKGGNSDWTV KLGVNLSYSA ILSRSPLYSK QMPYNSIIYK AFGRSSPVAS SPSKPKVSGK RSSRQRKYVV GKWCGKVWMS HQVHPFLLEQ
0901: DLEGEESERS CHLRVAMDED ATGKRSFPNN VSRDSTTMFG RKYCRKRKIR AKAVPRKKLT SFKREDGVSD DTSEDHSYKQ QWRASGNEEE SYFETGNTAS
1001: GDSSNQMSDP HKGIIRHKGY KEFESDDEVS DRSLGEEYTV RACAASESSM ENGSQHSMYD HDDDDDDIDR QPRGIPRSQQ TRVFRNPVSY ESEDNGVYQQ
1101: SGRISISNRQ ANRMVGEYDS AENSLEERGF CSTGKRQTRS TAKRIAKTKT VQSSRDTKGR FLQEFASGKK NEELDSYMEG PSTRLRVRHQ KPSRGSLETK
1201: PKKIGKKRSG NASFSRVATE KDVEEKEEEE EEEENEEEEC AAYQCNMEGC TMSFSSEKQL MLHKRNICPI KGCGKNFFSH KYLVQHQRVH SDDRPLKCPW
1301: KGCKMTFKWA WSRTEHIRVH TGARPYVCAE PDCGQTFRFV SDFSRHKRKT GHSVKKTNKR
0101: QQIGFCPRKQ RPVQRPVWQS GEEYSFGEFE FKAKNFEKNY LKKCGKKSQL SALEIETLYW RATVDKPFSV EYANDMPGSA FIPLSLAAAR RRESGGEGGT
0201: VGETAWNMRA MSRAEGSLLK FMKEEIPGVT SPMVYVAMMF SWFAWHVEDH DLHSLNYLHM GAGKTWYGVP KDAALAFEEV VRVHGYGEEL NPLVTFSTLG
0301: EKTTVMSPEV FVKAGIPCCR LVQNPGEFVV TFPGAYHSGF SHGFNFGEAS NIATPEWLRM AKDAAIRRAA INYPPMVSHL QLLYDFVLAL GSRVPTSINP
0401: KPRSSRLKDK ARSEGERLTK KLFVQNIIHN NELLSSLGKG SPVALLPQSS SDISVCSDLR IGSHLITNQE NPIQLKCEDL SSDSVVVDLS NGLKDTVSVK
0501: EKFTSLCERS RNHLASTEKD TQETLSDAER RKNDAAVALS DQRLFSCVTC GVLSFDCVAI VQPKEAAARY LMSADCSFFN DWTAASGSAN LGQAARSLHP
0601: QSKEKHDVNY FYNVPVQTMD HSVKTGDQKT STTSPTIAHK DNDVLGMLAS AYGDSSDSEE EDQKGLVTPS SKGETKTYDQ EGSDGHEEAR DGRTSDFNCQ
0701: RLTSEQNGLS KGGKSSLLEI ALPFIPRSDD DSCRLHVFCL EHAAEVEQQL RPFGGINLML LCHPEYPRIE AEAKIVAEEL VINHEWNDTE FRNVTREDEE
0801: TIQAALDNVE AKGGNSDWTV KLGVNLSYSA ILSRSPLYSK QMPYNSIIYK AFGRSSPVAS SPSKPKVSGK RSSRQRKYVV GKWCGKVWMS HQVHPFLLEQ
0901: DLEGEESERS CHLRVAMDED ATGKRSFPNN VSRDSTTMFG RKYCRKRKIR AKAVPRKKLT SFKREDGVSD DTSEDHSYKQ QWRASGNEEE SYFETGNTAS
1001: GDSSNQMSDP HKGIIRHKGY KEFESDDEVS DRSLGEEYTV RACAASESSM ENGSQHSMYD HDDDDDDIDR QPRGIPRSQQ TRVFRNPVSY ESEDNGVYQQ
1101: SGRISISNRQ ANRMVGEYDS AENSLEERGF CSTGKRQTRS TAKRIAKTKT VQSSRDTKGR FLQEFASGKK NEELDSYMEG PSTRLRVRHQ KPSRGSLETK
1201: PKKIGKKRSG NASFSRVATE KDVEEKEEEE EEEENEEEEC AAYQCNMEGC TMSFSSEKQL MLHKRNICPI KGCGKNFFSH KYLVQHQRVH SDDRPLKCPW
1301: KGCKMTFKWA WSRTEHIRVH TGARPYVCAE PDCGQTFRFV SDFSRHKRKT GHSVKKTNKR
Arabidopsis Description
REF6Lysine-specific demethylase REF6 [Source:UniProtKB/Swiss-Prot;Acc:Q9STM3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.