Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P17090_001 | Banana | cytosol | 56.59 | 56.86 |
| PGSC0003DMT400017820 | Potato | cytosol | 27.8 | 45.97 |
| Solyc02g067940.1.1 | Tomato | cytosol, plastid | 20.49 | 43.75 |
| KRG88946 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 19.51 | 41.24 |
| Zm00001d036468_P001 | Maize | nucleus | 40.98 | 39.25 |
| Zm00001d036465_P001 | Maize | nucleus | 40.98 | 39.25 |
| GSMUA_Achr6P28310_001 | Banana | mitochondrion | 28.29 | 37.66 |
| EER90325 | Sorghum | cytosol, mitochondrion | 43.9 | 37.34 |
| KRH72087 | Soybean | plastid | 30.73 | 37.28 |
| Solyc02g093710.1.1 | Tomato | mitochondrion | 34.63 | 37.17 |
| VIT_14s0219g00110.t01 | Wine grape | nucleus | 36.59 | 34.4 |
| PGSC0003DMT400032865 | Potato | cytosol | 32.2 | 34.38 |
| AT5G40690.1 | Thale cress | plastid | 33.66 | 32.86 |
| TraesCS3A01G516300.1 | Wheat | mitochondrion | 38.05 | 32.77 |
| TraesCS3D01G524000.1 | Wheat | mitochondrion | 37.56 | 32.49 |
| CDY36373 | Canola | cytosol, mitochondrion, nucleus, plastid | 33.17 | 31.92 |
| TraesCSU01G053700.1 | Wheat | mitochondrion | 37.07 | 31.8 |
| CDY42559 | Canola | cytosol | 32.68 | 31.46 |
| Bra025553.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 33.17 | 30.09 |
| HORVU4Hr1G000630.1 | Barley | mitochondrion | 17.07 | 22.88 |
| HORVU3Hr1G113050.1 | Barley | cytosol, mitochondrion, nucleus | 36.1 | 20.27 |
| HORVU5Hr1G017320.1 | Barley | plastid | 13.66 | 15.56 |
| HORVU0Hr1G018980.1 | Barley | cytosol, mitochondrion | 10.24 | 10.77 |
| HORVU2Hr1G123290.3 | Barley | extracellular | 11.71 | 10.08 |
| HORVU5Hr1G072670.2 | Barley | cytosol | 5.85 | 6.15 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P28320_001 | EnsemblPlants:GSMUA_Achr6T28320_001 | EnsemblPlantsGene:GSMUA_Achr6G28320_001 | PANTHER:PTHR34278 | PANTHER:PTHR34278:SF1 | SEG:seg |
| UniParc:UPI000296F8BF | UniProt:M0TAX7 | MapMan:35.2 | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G28320_001]
Coordinates
chr6:+:28693833..28694450
Molecular Weight (calculated)
22464.9 Da
IEP (calculated)
6.282
GRAVY (calculated)
-0.856
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MKREGRQHGT VRSSAILPAE SDPTPNNARV PNHVGAPPAA GFFAKAPSRP TNHSKCTARC RRERCKDCHF SPVSKSRDKA KGAHKLRSCD VVLNHRLVLW
101: RVVDGGRLPS SRKISASEIV DHLYASSQHE GDDYDDQNME EGAGYGHGGP LLEAVDPKEG HSGAKYEETG ESSTDSDEDS EIGFHMIGVT REYSDGEDWL
201: VVDEI
101: RVVDGGRLPS SRKISASEIV DHLYASSQHE GDDYDDQNME EGAGYGHGGP LLEAVDPKEG HSGAKYEETG ESSTDSDEDS EIGFHMIGVT REYSDGEDWL
201: VVDEI
001: MKREGKQHGM VRTYRILPPS LNPRPESKLV NPLTSRPTAG LFTKVTSKPT NHSKFTGKCG QARCLDCHMH PVTKSKAKTK GSSKVRTNDV TYKMLTWQVA
101: AGGPRPGLKL SGFSATGILD LMSDDYGYDH DYDYDEENEE EENRGSVVEE VVNIQSSDDG GETEEEGSND DDDDTDDDGR MSFCDVGMMM MMDHVEEYDE
201: GWYLVEEMMT
101: AGGPRPGLKL SGFSATGILD LMSDDYGYDH DYDYDEENEE EENRGSVVEE VVNIQSSDDG GETEEEGSND DDDDTDDDGR MSFCDVGMMM MMDHVEEYDE
201: GWYLVEEMMT
Arabidopsis Description
At5g40690 [Source:UniProtKB/TrEMBL;Acc:Q9FM29]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.