Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G018030.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G30150.1 | HORVU3Hr1G018030.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G258300.3 | Wheat | plastid | 93.3 | 94.45 |
| TraesCS4A01G046600.1 | Wheat | plastid | 93.3 | 94.3 |
| TraesCS4D01G258100.1 | Wheat | plastid | 92.69 | 94.02 |
| Os03t0203100-01 | Rice | cytosol, peroxisome | 34.64 | 69.31 |
| KXG39927 | Sorghum | cytosol, mitochondrion, peroxisome, plasma membrane | 66.53 | 67.15 |
| Zm00001d028096_P006 | Maize | cytosol, peroxisome, plasma membrane | 65.72 | 64.8 |
| GSMUA_AchrUn_... | Banana | extracellular | 4.98 | 62.03 |
| CDY15654 | Canola | cytosol, peroxisome, vacuole | 2.79 | 48.67 |
| CDY68304 | Canola | golgi | 2.39 | 44.34 |
| CDY55339 | Canola | extracellular | 2.64 | 42.62 |
| CDX68631 | Canola | extracellular | 2.54 | 38.46 |
| KRH15847 | Soybean | cytosol | 2.18 | 34.68 |
| VIT_03s0038g01490.t01 | Wine grape | nucleus | 35.86 | 34.12 |
| Solyc10g054860.1.1 | Tomato | nucleus | 32.15 | 30.8 |
| CDY28163 | Canola | cytosol, peroxisome, plasma membrane, plastid | 29.15 | 30.5 |
| Bra011167.1-P | Field mustard | cytosol, peroxisome, plasma membrane, plastid | 29.05 | 30.41 |
| CDX68630 | Canola | cytosol, nucleus, peroxisome, plastid | 29.05 | 30.26 |
| AT4G30150.1 | Thale cress | nucleus | 30.17 | 29.57 |
| KRH42586 | Soybean | mitochondrion, nucleus, peroxisome, plasma membrane | 29.86 | 28.8 |
| KRH44786 | Soybean | cytosol, nucleus, plasma membrane | 14.32 | 26.83 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G070090.5 | EnsemblPlantsGene:HORVU4Hr1G070090 | InterPro:Urb2/Npa2_C | ncoils:Coil | PANTHER:PTHR15682 | PFAM:PF10441 |
| SEG:seg | UniParc:UPI000B462BA7 | UniProt:A0A287PJ57 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr4H:-:574129592..574146127
Molecular Weight (calculated)
220836.0 Da
IEP (calculated)
6.886
GRAVY (calculated)
-0.043
Length
1969 amino acids
Sequence
(BLAST)
(BLAST)
0001: TRTERNAHAK PRTLASLSAP LGAPMAMEPA ASSPRGASRK RLRSQSPPPG GQAPTEPALA RPRFAENLDL VLSLQGKELS LQRKVELAFN FIKTESNRSS
0101: HGHRADNIQL LRMVSFIGNW VQSILVLSKK VPEPFDPVLD YRCWEILRFC IEKKPSVSIS LKLLNPLGRI AKDGSSRVQI GASCDDHESF LLFERVFDCV
0201: SFLFSSNTRA FFNAGVDLWT SCVTEAINLV QKVSTNEKKG CTILQNLGNC LLEQFSSFLR FYANPKNIFR PFVDKILDPL LELLVLLNSQ ANSIKHKQAG
0301: STLKIAEEIL SNGLFHPQHL SGYFGLKNLN KGSVKDVKGS YHRHLFERFK GIKEESKAVL LSGFGYLLQL FVTRARNQRT SLAPKGTSFK SPQKTSEGSE
0401: EPQQQGESIF EVFMQFMEPL VLECKSYLQK DLSDLGVTKL VEVHCMLKSI NEMLATVTEE KIYVPTEDTS EGSYLQFLQE IYRVLILMAE KMYDFWVSAV
0501: HLEDANVKKM LPLMFVEIVV AVGHFLEIEY KVMGSDLVKP WSMIFALSAI NVSSKDIKPC FLLTSKISSL SSQVIRTFSE LRQVAHSICT LCNTVRTFRA
0601: VSGPDAVPGP FSVASLSSHK CFESLATLLS SQTLRDAICT SVNSMPEGQS SRCIEELTVD LTDTLKWMKS RDEVVDLESQ GEPRLMSRKS VFHQRAELFG
0701: RYLSELYTSV LDSITVTASN TTLVAKSVER LVNTIRPNLS QLVRNESINS SEFISSVVGK NLSNKQCANW QKIPSLSWFF AFFFRIYTSC RSLHLQSVGL
0801: MPPDLAIETT ELVGNSFIVC CGKEWTNTSN IIAEGYFAWI VESAGSLLDA IEILSQSIPR NHSGFTTLFY TLHVMALQRL EDLNRQINAF DFLLEDGTQQ
0901: FDTKDRGNTE LLKDPCCLEA ARLTSFMMNN MRILSSAGTD SISSWDMSIY SLDEDSFHIA TWQLLCENID IWSSHASKKD LKSFFSNLIK FSFVQKRSCR
1001: DEESSDCQDS CREITLHTIS VELLCDTIIY DQKVLLKNLA SSFCGALKKS ISSFITRADE DNALLDISPD LMEILNKPIN EKLVGTYLDS THAHGVDKYR
1101: ICENLLNFCS TVPGFHSNTK SFLQLITYIL HLERLLLLTL LSRRYESCNP IELIRLFICC RRAMQNLVLK FGKEYPESKQ YSMFSELLGN SYSLIWLLRS
1201: VQEIIGLSHE IFGEHTDQKK NTLFSLVDKT SEIFSTLANL NSKFCLPGPK KQIGSSLKHT ANESDTSEHD GQAFDTLENS ALEHVKTMAE QLEKTTAVIP
1301: VTAKDRRCVI KIENSYDNVC WDKLLCTMSC IGGFLWGLVS AFESTIKDYP TASSEERKLM LHYASNFSRS IAKFETFVDI CLHVLFMENK DFGSVDLISG
1401: RLPQELDCEN GFLNIEVVMD GWTMHQLKGN KLQSDGPPGM KGSLLENLLS GENPFVAFTL RELYSVSAAV VKLKGLISFS GDVCRKACDP FQHLSLNPMV
1501: GTACIALQKI ADMSDWPDMF SLVWIDGILR YLEVLGTFPE LNLSKELYAQ VVNAHVSAIG KCILLQGKSA TLPTHEIGSN TKTLHLQNTS GYVVTKNIID
1601: RQNRLNSFIS RLRLSMRNFV IVASNTHLSA TLQVIERALV GVNQYSHSIY EVKTGTSDGG TVSSDVAAGI DCLYLVLGSV PGNRRVFQRT VPSLVGALFN
1701: IVLHLQSPLI FYIEKLPPLC PDLHPDAGAI VLMCVEVITS FVGRHTFQID ACHVSQCLHL PVMLFKGFKH LLADRSVSCS PENIREQIPG QSLASKEYIL
1801: DRQFSVDMYA ACCKLLCTVL RHQQSEVGQC VAVLEDSVNI LLGCLESADS KMVSMAGCFT WNKEEALKCA SFFRRIYEEM RQQKTIMEHH SMHFLAGYIS
1901: MFSGLGPFQT GITREIDEAL RPGVYSLIDI CQESDFQQLH TYLGEGPCRT TLANLVHDYK LHFQYQGKI
0101: HGHRADNIQL LRMVSFIGNW VQSILVLSKK VPEPFDPVLD YRCWEILRFC IEKKPSVSIS LKLLNPLGRI AKDGSSRVQI GASCDDHESF LLFERVFDCV
0201: SFLFSSNTRA FFNAGVDLWT SCVTEAINLV QKVSTNEKKG CTILQNLGNC LLEQFSSFLR FYANPKNIFR PFVDKILDPL LELLVLLNSQ ANSIKHKQAG
0301: STLKIAEEIL SNGLFHPQHL SGYFGLKNLN KGSVKDVKGS YHRHLFERFK GIKEESKAVL LSGFGYLLQL FVTRARNQRT SLAPKGTSFK SPQKTSEGSE
0401: EPQQQGESIF EVFMQFMEPL VLECKSYLQK DLSDLGVTKL VEVHCMLKSI NEMLATVTEE KIYVPTEDTS EGSYLQFLQE IYRVLILMAE KMYDFWVSAV
0501: HLEDANVKKM LPLMFVEIVV AVGHFLEIEY KVMGSDLVKP WSMIFALSAI NVSSKDIKPC FLLTSKISSL SSQVIRTFSE LRQVAHSICT LCNTVRTFRA
0601: VSGPDAVPGP FSVASLSSHK CFESLATLLS SQTLRDAICT SVNSMPEGQS SRCIEELTVD LTDTLKWMKS RDEVVDLESQ GEPRLMSRKS VFHQRAELFG
0701: RYLSELYTSV LDSITVTASN TTLVAKSVER LVNTIRPNLS QLVRNESINS SEFISSVVGK NLSNKQCANW QKIPSLSWFF AFFFRIYTSC RSLHLQSVGL
0801: MPPDLAIETT ELVGNSFIVC CGKEWTNTSN IIAEGYFAWI VESAGSLLDA IEILSQSIPR NHSGFTTLFY TLHVMALQRL EDLNRQINAF DFLLEDGTQQ
0901: FDTKDRGNTE LLKDPCCLEA ARLTSFMMNN MRILSSAGTD SISSWDMSIY SLDEDSFHIA TWQLLCENID IWSSHASKKD LKSFFSNLIK FSFVQKRSCR
1001: DEESSDCQDS CREITLHTIS VELLCDTIIY DQKVLLKNLA SSFCGALKKS ISSFITRADE DNALLDISPD LMEILNKPIN EKLVGTYLDS THAHGVDKYR
1101: ICENLLNFCS TVPGFHSNTK SFLQLITYIL HLERLLLLTL LSRRYESCNP IELIRLFICC RRAMQNLVLK FGKEYPESKQ YSMFSELLGN SYSLIWLLRS
1201: VQEIIGLSHE IFGEHTDQKK NTLFSLVDKT SEIFSTLANL NSKFCLPGPK KQIGSSLKHT ANESDTSEHD GQAFDTLENS ALEHVKTMAE QLEKTTAVIP
1301: VTAKDRRCVI KIENSYDNVC WDKLLCTMSC IGGFLWGLVS AFESTIKDYP TASSEERKLM LHYASNFSRS IAKFETFVDI CLHVLFMENK DFGSVDLISG
1401: RLPQELDCEN GFLNIEVVMD GWTMHQLKGN KLQSDGPPGM KGSLLENLLS GENPFVAFTL RELYSVSAAV VKLKGLISFS GDVCRKACDP FQHLSLNPMV
1501: GTACIALQKI ADMSDWPDMF SLVWIDGILR YLEVLGTFPE LNLSKELYAQ VVNAHVSAIG KCILLQGKSA TLPTHEIGSN TKTLHLQNTS GYVVTKNIID
1601: RQNRLNSFIS RLRLSMRNFV IVASNTHLSA TLQVIERALV GVNQYSHSIY EVKTGTSDGG TVSSDVAAGI DCLYLVLGSV PGNRRVFQRT VPSLVGALFN
1701: IVLHLQSPLI FYIEKLPPLC PDLHPDAGAI VLMCVEVITS FVGRHTFQID ACHVSQCLHL PVMLFKGFKH LLADRSVSCS PENIREQIPG QSLASKEYIL
1801: DRQFSVDMYA ACCKLLCTVL RHQQSEVGQC VAVLEDSVNI LLGCLESADS KMVSMAGCFT WNKEEALKCA SFFRRIYEEM RQQKTIMEHH SMHFLAGYIS
1901: MFSGLGPFQT GITREIDEAL RPGVYSLIDI CQESDFQQLH TYLGEGPCRT TLANLVHDYK LHFQYQGKI
0001: MLKRKLTSPK KSKPSKKTKK NSKTQFDDSP VEVVETKAEE LPRTGSKKSN PSKKRKQTKK NSETQFEDSS VEVVETKACD QEETVTDIVV EEGPWKNLEL
0101: ILSLQSNTLG FKKKVELAFS FVKGYGGENG TNEDEECQAV KISRLIIFLS DWIQSLLIPS EKNIKVKCDL DSEPCLDFRC WEIFSFCLKE ATILGVSLNL
0201: SRNLLKAIGL ITGRFLSALN ESLATGVDFC NGQGFVVYSS VVDCLGLLFS SKSGMSNDNL DLWFSTVEPV LKLTHTVLVE NIKDSLGDRH VLKFSCLVLE
0301: PFSRFLMTHP TTKNGFCDFL DKLFEPFMDV LGLLNLIEDK NKDLEISLLR LIEDILSLAL FHSAHIDGFL GLGGAKKYLP ESKENKTILK SYHRHFFTKF
0401: KNMLLMKKEL ELSCMGSLFK VFIYRVMKQQ RDPNQLQEGM MTKASNARQA EERPWKLADT ATNDNGSSTK SHYSSSLRLE TRKSIFDFFL HLMEPILLEI
0501: NGYNQSGSEM APLLGDFCCV IKSANSLLFN FAHERMYVKT EDASEGACSC FLRTIFKTIV SVASELKKHC PYDNGSEMHV LLAKELVTAI GYLLHIEYEI
0601: IESDLVTLWL IILSFLEFSS LSPENSEGDC PLTSLLVGLG CQLITLYSDL RQVSVAVFSL FKAVRLVMPV VTPADGDDDE MIATEELPLS TVFPFRLERS
0701: EKSVEKLLSS QALRLAIHKA IKVIPEGQAS GCIKSLTADV SKTMKWIKQV CCSTGATEQD GQVAAFLAGS LSDIYSLILD SITITTGNSN LVGQSMKDLL
0801: DLISPCLTHL VSSDSDCIEN FLSALTGKDL EIVMAEKKIE TYRKSVRLFV IFVLRIYMSS RSLYRQVISL MPPKKTKDMA GIKGDSVAVR CGSDWIKEKS
0901: WNYEGYFSWI SQPSASIVDT IKHISAFYLK DDSADCSLLI YILYGVALQR LVDLNSHIKS LDYVSQISDN QINDTMLKHV SVLKREGEEL TDFLLGNNII
1001: SGFVDDGTFE TIKDTDQWVL RVSGINGKCL PTMRLWVLSQ HIDLWCPHAG KKKLKNFLSQ LIGSSVPCIL NGVGMSTLGW ENNVDKGSQK KKIGLEQFSF
1101: GLLFDSVLYE HEFVRRYLAP SFSHVLKMTA ETFFKDITEE VNFDSPSDWS EVLILLESSI ANLSGKLKSE AFLEAHVSLL DNRKFTACQN LLNLLGVMPK
1201: EYTNKKSFQL YASYVLDLER FIVFSMLRCL NKLSCGDMQN LFSLFSTCRK TLKSIAMISC DKVLGATKLP LSDSSLLASW LFKSAQAATC QVRFRNDVTG
1301: KARDALFSLM DHTSYMFLTV SKYQFSKALP FSDEKLISSE ISEGTGQANL IIENLTEQAE TLLNALRATF RDEKTAFKCE SLILNKLTPI FSCFSGLLWG
1401: LASAVSNRDM QKNHQNAKLR WKSEQFSKLS RIIHVLSNFF EVFAQCLFLS GDVQREIQTN INWTRLLDGT EGSNGLVCGD VVETSDVKKK IIESLIKGDS
1501: SEVVLALKHL LIASAAILRL NLQIDGITFS PTFVSVLTNI SNDLLSVFAD MSEAPLEFSF IWLDGAVKVV EELGSQFCLS NPTLNIDLYS KLIELHLKVI
1601: GKCISLQGKE ATLESHETGF GTNAIHAKLV LTEKKRSHRL HWLDELKQRL RMSFKVFIHS SSELHLLSGV QAIERALVGV WEVCPAIYCI QTGNRDGGRI
1701: SETVAAGLDC LDLILEHATG RKRLNVVKRH IQGLMSAVFG IMAHMQSPFI FFSNAVVGNQ GSNSPDSGAV ILMCVGVLIR IAGKHALFRM DSSHVSQSIH
1801: IPGAIFLDYL HATRVGFSVL DGNLLSKDDQ QQDLLGCSKE LQVDRKFSVS LYAACCRLLY TAVKHHKSQT EGSIATLQES VSALLHCLET AGKNLGNCVS
1901: WEVEEGIRCA CFLRRIYEEL RQQKEVFGQH CFKFLSTYIW VSSGYGPLKT GLEREVDEAL RPGVYALIDS CSPNDLQYLH TVFGEGPCRN SLATLQQDYK
2001: LNFKYGGKV
0101: ILSLQSNTLG FKKKVELAFS FVKGYGGENG TNEDEECQAV KISRLIIFLS DWIQSLLIPS EKNIKVKCDL DSEPCLDFRC WEIFSFCLKE ATILGVSLNL
0201: SRNLLKAIGL ITGRFLSALN ESLATGVDFC NGQGFVVYSS VVDCLGLLFS SKSGMSNDNL DLWFSTVEPV LKLTHTVLVE NIKDSLGDRH VLKFSCLVLE
0301: PFSRFLMTHP TTKNGFCDFL DKLFEPFMDV LGLLNLIEDK NKDLEISLLR LIEDILSLAL FHSAHIDGFL GLGGAKKYLP ESKENKTILK SYHRHFFTKF
0401: KNMLLMKKEL ELSCMGSLFK VFIYRVMKQQ RDPNQLQEGM MTKASNARQA EERPWKLADT ATNDNGSSTK SHYSSSLRLE TRKSIFDFFL HLMEPILLEI
0501: NGYNQSGSEM APLLGDFCCV IKSANSLLFN FAHERMYVKT EDASEGACSC FLRTIFKTIV SVASELKKHC PYDNGSEMHV LLAKELVTAI GYLLHIEYEI
0601: IESDLVTLWL IILSFLEFSS LSPENSEGDC PLTSLLVGLG CQLITLYSDL RQVSVAVFSL FKAVRLVMPV VTPADGDDDE MIATEELPLS TVFPFRLERS
0701: EKSVEKLLSS QALRLAIHKA IKVIPEGQAS GCIKSLTADV SKTMKWIKQV CCSTGATEQD GQVAAFLAGS LSDIYSLILD SITITTGNSN LVGQSMKDLL
0801: DLISPCLTHL VSSDSDCIEN FLSALTGKDL EIVMAEKKIE TYRKSVRLFV IFVLRIYMSS RSLYRQVISL MPPKKTKDMA GIKGDSVAVR CGSDWIKEKS
0901: WNYEGYFSWI SQPSASIVDT IKHISAFYLK DDSADCSLLI YILYGVALQR LVDLNSHIKS LDYVSQISDN QINDTMLKHV SVLKREGEEL TDFLLGNNII
1001: SGFVDDGTFE TIKDTDQWVL RVSGINGKCL PTMRLWVLSQ HIDLWCPHAG KKKLKNFLSQ LIGSSVPCIL NGVGMSTLGW ENNVDKGSQK KKIGLEQFSF
1101: GLLFDSVLYE HEFVRRYLAP SFSHVLKMTA ETFFKDITEE VNFDSPSDWS EVLILLESSI ANLSGKLKSE AFLEAHVSLL DNRKFTACQN LLNLLGVMPK
1201: EYTNKKSFQL YASYVLDLER FIVFSMLRCL NKLSCGDMQN LFSLFSTCRK TLKSIAMISC DKVLGATKLP LSDSSLLASW LFKSAQAATC QVRFRNDVTG
1301: KARDALFSLM DHTSYMFLTV SKYQFSKALP FSDEKLISSE ISEGTGQANL IIENLTEQAE TLLNALRATF RDEKTAFKCE SLILNKLTPI FSCFSGLLWG
1401: LASAVSNRDM QKNHQNAKLR WKSEQFSKLS RIIHVLSNFF EVFAQCLFLS GDVQREIQTN INWTRLLDGT EGSNGLVCGD VVETSDVKKK IIESLIKGDS
1501: SEVVLALKHL LIASAAILRL NLQIDGITFS PTFVSVLTNI SNDLLSVFAD MSEAPLEFSF IWLDGAVKVV EELGSQFCLS NPTLNIDLYS KLIELHLKVI
1601: GKCISLQGKE ATLESHETGF GTNAIHAKLV LTEKKRSHRL HWLDELKQRL RMSFKVFIHS SSELHLLSGV QAIERALVGV WEVCPAIYCI QTGNRDGGRI
1701: SETVAAGLDC LDLILEHATG RKRLNVVKRH IQGLMSAVFG IMAHMQSPFI FFSNAVVGNQ GSNSPDSGAV ILMCVGVLIR IAGKHALFRM DSSHVSQSIH
1801: IPGAIFLDYL HATRVGFSVL DGNLLSKDDQ QQDLLGCSKE LQVDRKFSVS LYAACCRLLY TAVKHHKSQT EGSIATLQES VSALLHCLET AGKNLGNCVS
1901: WEVEEGIRCA CFLRRIYEEL RQQKEVFGQH CFKFLSTYIW VSSGYGPLKT GLEREVDEAL RPGVYALIDS CSPNDLQYLH TVFGEGPCRN SLATLQQDYK
2001: LNFKYGGKV
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: /.../Link). [Source:TAIR;Acc:AT4G30150]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.