Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G30150.1 | KRH42483 | AT2G01950.1 | 19000166 |
| AT4G30150.1 | KRH58580 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42586 | Soybean | mitochondrion, nucleus, peroxisome, plasma membrane | 89.25 | 45.94 |
| VIT_03s0038g01490.t01 | Wine grape | nucleus | 37.11 | 18.85 |
| Solyc10g054860.1.1 | Tomato | nucleus | 31.3 | 16.01 |
| CDY28163 | Canola | cytosol, peroxisome, plasma membrane, plastid | 27.97 | 15.62 |
| CDX68630 | Canola | cytosol, nucleus, peroxisome, plastid | 27.97 | 15.56 |
| Bra011167.1-P | Field mustard | cytosol, peroxisome, plasma membrane, plastid | 27.78 | 15.52 |
| AT4G30150.1 | Thale cress | nucleus | 29.5 | 15.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.78 | 15.18 |
| KXG39927 | Sorghum | cytosol, mitochondrion, peroxisome, plasma membrane | 27.21 | 14.66 |
| HORVU4Hr1G070090.5 | Barley | plastid | 26.83 | 14.32 |
| TraesCS4D01G258100.1 | Wheat | plastid | 26.36 | 14.27 |
| TraesCS4A01G046600.1 | Wheat | plastid | 26.36 | 14.22 |
| TraesCS4B01G258300.3 | Wheat | plastid | 25.98 | 14.04 |
| Zm00001d028096_P006 | Maize | cytosol, peroxisome, plasma membrane | 25.98 | 13.67 |
| Os03t0203100-01 | Rice | cytosol, peroxisome | 8.18 | 8.74 |
| KRH15847 | Soybean | cytosol | 0.48 | 4.03 |
| GSMUA_AchrUn_... | Banana | extracellular | 0.48 | 3.16 |
| CDX68631 | Canola | extracellular | 0.38 | 3.08 |
| CDY68304 | Canola | golgi | 0.29 | 2.83 |
| CDY55339 | Canola | extracellular | 0.19 | 1.64 |
| CDY15654 | Canola | cytosol, peroxisome, vacuole | 0.1 | 0.88 |
Protein Annotations
| EMBL:ACUP02004958 | EnsemblPlants:KRH44786 | EnsemblPlantsGene:GLYMA_08G231200 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0042254 |
| ncoils:Coil | PANTHER:PTHR15682 | ProteinID:KRH44786 | ProteinID:KRH44786.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0006ED563B | UniProt:A0A0R0IUM7 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:18961449..18967543
Molecular Weight (calculated)
120518.0 Da
IEP (calculated)
7.816
GRAVY (calculated)
-0.003
Length
1051 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQNPKRKDIF DAQPRETSKR HPLEPHSPWN NLNLILCIQD KHHGVLSHGL FHHMHIPEFL SLHVSENDDA SWHQIVENID GSRQPVPGKH CSSNNISADL
0101: QNSLFNFFVL IMEPLLLKIN AYIQVEVDAN PLLLDFHALL KSIGKLLASF MQDKVYVRTE DTSGGACLNF LKKIFNTLMT SFTSVLHFSN YDTTNRTEIS
0201: STLPANEILV AMGYLLQIEY EVIVTWCNSR YDCLAKGRGM MFWVRGNFFK IVILFVLIQL VLFLVFLSNE FHSEAVERLL SSEKFINAIY KAVESIPEGQ
0301: VCGCIRQITE DISESLRWMK DFCPLVDGKK LQNFNLQGEL LGRGLSRLYC LVLGSVIITN SNRNLLGVAV NELMALVRPY LSILVGQQPD TICKFFSSVI
0401: GETVDQVVRK GKVLKKFGRS SQWVLVFFFQ LFVSCQSLYR QASLRPPDLP KMSAEVEDYT TYSASELMER IDKIDFGYFS WIVQPSSSLL VVMQFISDIY
0501: LKLGSDDSSP LIYIFQSMAL RRLVYLNKQI KLFKYLKKKH YLQKKSYRSQ IKTLKEEAAD LTNFILEYLS CVYQSPIFVS DYVTCEDVVS VVTQSIQDHI
0601: KERCNQWDWD LGVYAANKKS LPTLIWSKLC KNVDIWSNHA SKKQLKTFFS HLLHAYLHSV TSSFQEPGVQ EIDKCKLLKT ITLSQISSEL LNDSLFYEQK
0701: FAHRSLASMF CLALEKLVLP LFSNIPFFKF LSSTTPSCDK LPADISRKDE TFPVTDKIFR DCHQLLDLLC RMQDKNARSF SHLLTCIFNL ERLLIGALLY
0801: FQSTMHWDYY FEYLRLFVSC RKTLWHILVG FYDKANTIPF SPNSIISGSS LPVLWLSKSL SVVVGIKESH STKNIILCKS MMFSLMHYTS NVLFGIGKYQ
0901: IVHAFSISKE AVMPCEEISN HKISHEENHL LPYSQDSPKL EALKCLTFMA ENLRKQIQSL LVSVHNTPCN VNVGFGLTYE NINRLSSSAC CFSRLLWGLL
1001: TSSTDQTDAK DSDEKEKVLM WKSEHASELD SCISSLMELT NVFCKQIAYR E
0101: QNSLFNFFVL IMEPLLLKIN AYIQVEVDAN PLLLDFHALL KSIGKLLASF MQDKVYVRTE DTSGGACLNF LKKIFNTLMT SFTSVLHFSN YDTTNRTEIS
0201: STLPANEILV AMGYLLQIEY EVIVTWCNSR YDCLAKGRGM MFWVRGNFFK IVILFVLIQL VLFLVFLSNE FHSEAVERLL SSEKFINAIY KAVESIPEGQ
0301: VCGCIRQITE DISESLRWMK DFCPLVDGKK LQNFNLQGEL LGRGLSRLYC LVLGSVIITN SNRNLLGVAV NELMALVRPY LSILVGQQPD TICKFFSSVI
0401: GETVDQVVRK GKVLKKFGRS SQWVLVFFFQ LFVSCQSLYR QASLRPPDLP KMSAEVEDYT TYSASELMER IDKIDFGYFS WIVQPSSSLL VVMQFISDIY
0501: LKLGSDDSSP LIYIFQSMAL RRLVYLNKQI KLFKYLKKKH YLQKKSYRSQ IKTLKEEAAD LTNFILEYLS CVYQSPIFVS DYVTCEDVVS VVTQSIQDHI
0601: KERCNQWDWD LGVYAANKKS LPTLIWSKLC KNVDIWSNHA SKKQLKTFFS HLLHAYLHSV TSSFQEPGVQ EIDKCKLLKT ITLSQISSEL LNDSLFYEQK
0701: FAHRSLASMF CLALEKLVLP LFSNIPFFKF LSSTTPSCDK LPADISRKDE TFPVTDKIFR DCHQLLDLLC RMQDKNARSF SHLLTCIFNL ERLLIGALLY
0801: FQSTMHWDYY FEYLRLFVSC RKTLWHILVG FYDKANTIPF SPNSIISGSS LPVLWLSKSL SVVVGIKESH STKNIILCKS MMFSLMHYTS NVLFGIGKYQ
0901: IVHAFSISKE AVMPCEEISN HKISHEENHL LPYSQDSPKL EALKCLTFMA ENLRKQIQSL LVSVHNTPCN VNVGFGLTYE NINRLSSSAC CFSRLLWGLL
1001: TSSTDQTDAK DSDEKEKVLM WKSEHASELD SCISSLMELT NVFCKQIAYR E
0001: MLKRKLTSPK KSKPSKKTKK NSKTQFDDSP VEVVETKAEE LPRTGSKKSN PSKKRKQTKK NSETQFEDSS VEVVETKACD QEETVTDIVV EEGPWKNLEL
0101: ILSLQSNTLG FKKKVELAFS FVKGYGGENG TNEDEECQAV KISRLIIFLS DWIQSLLIPS EKNIKVKCDL DSEPCLDFRC WEIFSFCLKE ATILGVSLNL
0201: SRNLLKAIGL ITGRFLSALN ESLATGVDFC NGQGFVVYSS VVDCLGLLFS SKSGMSNDNL DLWFSTVEPV LKLTHTVLVE NIKDSLGDRH VLKFSCLVLE
0301: PFSRFLMTHP TTKNGFCDFL DKLFEPFMDV LGLLNLIEDK NKDLEISLLR LIEDILSLAL FHSAHIDGFL GLGGAKKYLP ESKENKTILK SYHRHFFTKF
0401: KNMLLMKKEL ELSCMGSLFK VFIYRVMKQQ RDPNQLQEGM MTKASNARQA EERPWKLADT ATNDNGSSTK SHYSSSLRLE TRKSIFDFFL HLMEPILLEI
0501: NGYNQSGSEM APLLGDFCCV IKSANSLLFN FAHERMYVKT EDASEGACSC FLRTIFKTIV SVASELKKHC PYDNGSEMHV LLAKELVTAI GYLLHIEYEI
0601: IESDLVTLWL IILSFLEFSS LSPENSEGDC PLTSLLVGLG CQLITLYSDL RQVSVAVFSL FKAVRLVMPV VTPADGDDDE MIATEELPLS TVFPFRLERS
0701: EKSVEKLLSS QALRLAIHKA IKVIPEGQAS GCIKSLTADV SKTMKWIKQV CCSTGATEQD GQVAAFLAGS LSDIYSLILD SITITTGNSN LVGQSMKDLL
0801: DLISPCLTHL VSSDSDCIEN FLSALTGKDL EIVMAEKKIE TYRKSVRLFV IFVLRIYMSS RSLYRQVISL MPPKKTKDMA GIKGDSVAVR CGSDWIKEKS
0901: WNYEGYFSWI SQPSASIVDT IKHISAFYLK DDSADCSLLI YILYGVALQR LVDLNSHIKS LDYVSQISDN QINDTMLKHV SVLKREGEEL TDFLLGNNII
1001: SGFVDDGTFE TIKDTDQWVL RVSGINGKCL PTMRLWVLSQ HIDLWCPHAG KKKLKNFLSQ LIGSSVPCIL NGVGMSTLGW ENNVDKGSQK KKIGLEQFSF
1101: GLLFDSVLYE HEFVRRYLAP SFSHVLKMTA ETFFKDITEE VNFDSPSDWS EVLILLESSI ANLSGKLKSE AFLEAHVSLL DNRKFTACQN LLNLLGVMPK
1201: EYTNKKSFQL YASYVLDLER FIVFSMLRCL NKLSCGDMQN LFSLFSTCRK TLKSIAMISC DKVLGATKLP LSDSSLLASW LFKSAQAATC QVRFRNDVTG
1301: KARDALFSLM DHTSYMFLTV SKYQFSKALP FSDEKLISSE ISEGTGQANL IIENLTEQAE TLLNALRATF RDEKTAFKCE SLILNKLTPI FSCFSGLLWG
1401: LASAVSNRDM QKNHQNAKLR WKSEQFSKLS RIIHVLSNFF EVFAQCLFLS GDVQREIQTN INWTRLLDGT EGSNGLVCGD VVETSDVKKK IIESLIKGDS
1501: SEVVLALKHL LIASAAILRL NLQIDGITFS PTFVSVLTNI SNDLLSVFAD MSEAPLEFSF IWLDGAVKVV EELGSQFCLS NPTLNIDLYS KLIELHLKVI
1601: GKCISLQGKE ATLESHETGF GTNAIHAKLV LTEKKRSHRL HWLDELKQRL RMSFKVFIHS SSELHLLSGV QAIERALVGV WEVCPAIYCI QTGNRDGGRI
1701: SETVAAGLDC LDLILEHATG RKRLNVVKRH IQGLMSAVFG IMAHMQSPFI FFSNAVVGNQ GSNSPDSGAV ILMCVGVLIR IAGKHALFRM DSSHVSQSIH
1801: IPGAIFLDYL HATRVGFSVL DGNLLSKDDQ QQDLLGCSKE LQVDRKFSVS LYAACCRLLY TAVKHHKSQT EGSIATLQES VSALLHCLET AGKNLGNCVS
1901: WEVEEGIRCA CFLRRIYEEL RQQKEVFGQH CFKFLSTYIW VSSGYGPLKT GLEREVDEAL RPGVYALIDS CSPNDLQYLH TVFGEGPCRN SLATLQQDYK
2001: LNFKYGGKV
0101: ILSLQSNTLG FKKKVELAFS FVKGYGGENG TNEDEECQAV KISRLIIFLS DWIQSLLIPS EKNIKVKCDL DSEPCLDFRC WEIFSFCLKE ATILGVSLNL
0201: SRNLLKAIGL ITGRFLSALN ESLATGVDFC NGQGFVVYSS VVDCLGLLFS SKSGMSNDNL DLWFSTVEPV LKLTHTVLVE NIKDSLGDRH VLKFSCLVLE
0301: PFSRFLMTHP TTKNGFCDFL DKLFEPFMDV LGLLNLIEDK NKDLEISLLR LIEDILSLAL FHSAHIDGFL GLGGAKKYLP ESKENKTILK SYHRHFFTKF
0401: KNMLLMKKEL ELSCMGSLFK VFIYRVMKQQ RDPNQLQEGM MTKASNARQA EERPWKLADT ATNDNGSSTK SHYSSSLRLE TRKSIFDFFL HLMEPILLEI
0501: NGYNQSGSEM APLLGDFCCV IKSANSLLFN FAHERMYVKT EDASEGACSC FLRTIFKTIV SVASELKKHC PYDNGSEMHV LLAKELVTAI GYLLHIEYEI
0601: IESDLVTLWL IILSFLEFSS LSPENSEGDC PLTSLLVGLG CQLITLYSDL RQVSVAVFSL FKAVRLVMPV VTPADGDDDE MIATEELPLS TVFPFRLERS
0701: EKSVEKLLSS QALRLAIHKA IKVIPEGQAS GCIKSLTADV SKTMKWIKQV CCSTGATEQD GQVAAFLAGS LSDIYSLILD SITITTGNSN LVGQSMKDLL
0801: DLISPCLTHL VSSDSDCIEN FLSALTGKDL EIVMAEKKIE TYRKSVRLFV IFVLRIYMSS RSLYRQVISL MPPKKTKDMA GIKGDSVAVR CGSDWIKEKS
0901: WNYEGYFSWI SQPSASIVDT IKHISAFYLK DDSADCSLLI YILYGVALQR LVDLNSHIKS LDYVSQISDN QINDTMLKHV SVLKREGEEL TDFLLGNNII
1001: SGFVDDGTFE TIKDTDQWVL RVSGINGKCL PTMRLWVLSQ HIDLWCPHAG KKKLKNFLSQ LIGSSVPCIL NGVGMSTLGW ENNVDKGSQK KKIGLEQFSF
1101: GLLFDSVLYE HEFVRRYLAP SFSHVLKMTA ETFFKDITEE VNFDSPSDWS EVLILLESSI ANLSGKLKSE AFLEAHVSLL DNRKFTACQN LLNLLGVMPK
1201: EYTNKKSFQL YASYVLDLER FIVFSMLRCL NKLSCGDMQN LFSLFSTCRK TLKSIAMISC DKVLGATKLP LSDSSLLASW LFKSAQAATC QVRFRNDVTG
1301: KARDALFSLM DHTSYMFLTV SKYQFSKALP FSDEKLISSE ISEGTGQANL IIENLTEQAE TLLNALRATF RDEKTAFKCE SLILNKLTPI FSCFSGLLWG
1401: LASAVSNRDM QKNHQNAKLR WKSEQFSKLS RIIHVLSNFF EVFAQCLFLS GDVQREIQTN INWTRLLDGT EGSNGLVCGD VVETSDVKKK IIESLIKGDS
1501: SEVVLALKHL LIASAAILRL NLQIDGITFS PTFVSVLTNI SNDLLSVFAD MSEAPLEFSF IWLDGAVKVV EELGSQFCLS NPTLNIDLYS KLIELHLKVI
1601: GKCISLQGKE ATLESHETGF GTNAIHAKLV LTEKKRSHRL HWLDELKQRL RMSFKVFIHS SSELHLLSGV QAIERALVGV WEVCPAIYCI QTGNRDGGRI
1701: SETVAAGLDC LDLILEHATG RKRLNVVKRH IQGLMSAVFG IMAHMQSPFI FFSNAVVGNQ GSNSPDSGAV ILMCVGVLIR IAGKHALFRM DSSHVSQSIH
1801: IPGAIFLDYL HATRVGFSVL DGNLLSKDDQ QQDLLGCSKE LQVDRKFSVS LYAACCRLLY TAVKHHKSQT EGSIATLQES VSALLHCLET AGKNLGNCVS
1901: WEVEEGIRCA CFLRRIYEEL RQQKEVFGQH CFKFLSTYIW VSSGYGPLKT GLEREVDEAL RPGVYALIDS CSPNDLQYLH TVFGEGPCRN SLATLQQDYK
2001: LNFKYGGKV
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: /.../Link). [Source:TAIR;Acc:AT4G30150]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.