Factsheet for HORVU5Hr1G061840.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

mitochondrion 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G051800.3	Barley	cytosol, nucleus, plasma membrane	89.97	88.14
TraesCS5D01G216900.1	Wheat	cytosol, nucleus, plasma membrane	85.81	82.94
TraesCS5B01G208700.1	Wheat	cytosol, nucleus, plasma membrane	81.31	82.46
TraesCS5A01G215100.1	Wheat	cytosol	85.47	80.98
Os09t0441900-01	Rice	cytosol	65.4	44.37
EER96796	Sorghum	cytosol	59.52	43.0
Solyc07g041980.2.1	Tomato	cytosol, nucleus, plastid	22.84	31.58
GSMUA_Achr9P14410_001	Banana	cytosol, nucleus, plasma membrane, plastid	36.68	30.72
HORVU7Hr1G001910.1	Barley	cytosol, mitochondrion, nucleus	16.26	27.81
KRH02600	Soybean	plastid	20.42	25.88
GSMUA_Achr5P05230_001	Banana	cytosol, nucleus, plasma membrane, plastid	29.76	25.0
CDY16550	Canola	cytosol	22.15	24.62
CDX92447	Canola	cytosol	22.15	24.62
AT5G20635.1	Thale cress	cytosol	21.11	24.3
KRH19328	Soybean	plastid	19.72	24.26
GSMUA_Achr3P05970_001	Banana	plasma membrane	38.06	23.71
CDX70936	Canola	plastid	19.38	23.53
CDY45076	Canola	cytosol, nucleus, plasma membrane, plastid	20.07	23.39
KRH47625	Soybean	cytosol	12.8	23.27
KRH12546	Soybean	plastid	16.95	22.79
KRH37500	Soybean	plastid	16.95	22.58
CDY51840	Canola	plastid	8.3	22.22
VIT_11s0016g00940.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	11.42	21.57
Zm00001d005824_P001	Maize	cytosol	14.88	11.08
Zm00001d020629_P001	Maize	cytosol	12.46	7.44

Protein Annotations

EnsemblPlants:HORVU5Hr1G061840.1	EnsemblPlantsGene:HORVU5Hr1G061840	PANTHER:PTHR32378	PANTHER:PTHR32378:SF9	SEG:seg	UniParc:UPI000B47B834
UniProt:A0A287RGF1	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:482214543..482217952

Molecular Weight (calculated)

30807.3 Da

IEP (calculated)

7.778

GRAVY (calculated)

-0.006

Length

289 amino acids

Sequence
(BLAST)

001: MLSVCLRVLC FPVYSPSFCE RTNTWCSAFK EQISEGAQDE LHLLEGAQPV SRSACLKEVN EFVGTKQDPL IPINKRKHRS CRLYWWIRSK LCVCASWLCC
101: SCQCLPTCKR PSCLDCSCCE PNCSCCSPNC CSCFKIPSCC KPSCGCFGCC SCSKPQCCSG GCNPCGECKP ECGSCSAGGC CGDCKPSCSC CGEQCQCCSC
201: PRCTGGCFKL PKCSCAQCFN CQSSCCKGQP SCFRCQSSCC DKGGCCSSGS CLSCPKPSCP ECSCGCVWSC KNCTDGCRCA RCCASGCLC

Best Arabidopsis Sequence Match ( AT5G20635.2 )
(BLAST)

001: MMFLNQYFEC RYDQGEIKFI EGVQPASRCI KEVSDFVVAN SDPLIPAQRK SRRSFRFWKW LCGPCLSLVS FCCCCQSKCS CHLRKPKCCN CTSCSCIGSK
101: CCDGSCCSNI CCCPRLSCPS CSCFRGCWCS CPDMSCCIPS CFRSCSCTRP SCLNKKKSSC CSCNCKIRWS SCFSCPKVRL CSCCFCNCKN LCSNPCCLAF

Arabidopsis Description

GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [plasma membrane,extracellular,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.