CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02600	Soybean	plastid	90.21	92.98
KRH12546	Soybean	plastid	51.49	56.28
KRH37500	Soybean	plastid	50.21	54.38
CDY51840	Canola	plastid	23.83	51.85
Solyc07g041980.2.1	Tomato	cytosol, nucleus, plastid	44.68	50.24
GSMUA_Achr8P30570_001	Banana	cytosol, plastid	21.28	48.08
VIT_11s0016g00940.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	31.06	47.71
AT5G20635.1	Thale cress	cytosol	43.83	41.04
CDX70936	Canola	plastid	40.85	40.34
CDX92447	Canola	cytosol	44.26	40.0
CDY16550	Canola	cytosol	44.26	40.0
CDY45076	Canola	cytosol, nucleus, plasma membrane, plastid	40.43	38.31
KRH47625	Soybean	cytosol	22.98	33.96
HORVU7Hr1G001910.1	Barley	cytosol, mitochondrion, nucleus	23.83	33.14
TraesCS7A01G017700.1	Wheat	cytosol, mitochondrion, nucleus	23.83	33.14
TraesCS4A01G474000.2	Wheat	cytosol, mitochondrion, nucleus	23.83	32.94
EER92150	Sorghum	cytosol, nucleus, plasma membrane	27.66	32.83
TraesCS7D01G015000.1	Wheat	cytosol, mitochondrion, nucleus	23.4	32.54
Zm00001d029464_P001	Maize	cytosol, nucleus, plasma membrane	25.53	30.3
Os03t0407400-00	Rice	cytosol	28.09	28.45
GSMUA_Achr9P14410_001	Banana	cytosol, nucleus, plasma membrane, plastid	39.15	26.67
TraesCS5B01G208700.1	Wheat	cytosol, nucleus, plasma membrane	31.06	25.61
HORVU3Hr1G051800.3	Barley	cytosol, nucleus, plasma membrane	31.49	25.08
GSMUA_Achr5P05230_001	Banana	cytosol, nucleus, plasma membrane, plastid	36.6	25.0
EES13964	Sorghum	cytosol	30.64	24.83
TraesCS5D01G216900.1	Wheat	cytosol, nucleus, plasma membrane	30.64	24.08
TraesCS5A01G215100.1	Wheat	cytosol	31.06	23.93
HORVU5Hr1G061840.1	Barley	extracellular, plasma membrane	24.26	19.72
GSMUA_Achr3P05970_001	Banana	plasma membrane	38.3	19.4
Os09t0441900-01	Rice	cytosol	34.47	19.01
EER96796	Sorghum	cytosol	31.91	18.75
Zm00001d005824_P001	Maize	cytosol	18.72	11.34
Zm00001d020629_P001	Maize	cytosol	17.02	8.26

Protein Annotations

EntrezGene:100787066	MapMan:27.6.2.3	UniProt:A0A0R0GLP4	EMBL:ACUP02008173	ncoils:Coil	InterPro:G-protein_gamma-like_dom
EnsemblPlantsGene:GLYMA_13G110900	GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005834	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	InterPro:IPR015898	EnsemblPlants:KRH19328	ProteinID:KRH19328	ProteinID:KRH19328.1
PFAM:PF00631	PANTHER:PTHR32378	PANTHER:PTHR32378:SF9	SMART:SM01224	UniParc:UPI0003DE7983	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:22448869..22451964

Molecular Weight (calculated)

25653.4 Da

IEP (calculated)

7.968

GRAVY (calculated)

-0.050

Length

235 amino acids

Sequence
(BLAST)

001: MATSPTTTTT TTVRSSSVPS LPPPSPKSPP EYPDLYGKRR ETARVHMLER EITFLEQEEL KSVEGLQAAS RCCKEIADYV MANADPLLPS TKKNRRSCGF
101: WKWLCGMPCF NLSWICCCCC CCEGLSLQLK LPRCCCDCKP CSCSCSCLPS IKCCSLPKWS CCCSCPKSNC CKEGCGFGNC CTFPRSCNFG CPTCPSCPSC
201: CSCKCTCTCS CPSCPKVSPC CCCTKSCWRP CCFCC

Best Arabidopsis Sequence Match ( AT5G20635.1 )
(BLAST)

001: MSAPSGGGEG GGKESAAGGV SSSSLAPSSL PPPRPKSPPE YPDLYGKRRE AARVQMLERE IGFLEGEIKF IEGVQPASRC IKEVSDFVVA NSDPLIPAQR
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F

Arabidopsis Description

GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.