Factsheet for Os03t0407400-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
plastid 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	extracellular, golgi, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G015000.1	Wheat	cytosol, mitochondrion, nucleus	41.81	57.4
TraesCS7A01G017700.1	Wheat	cytosol, mitochondrion, nucleus	41.81	57.4
Zm00001d029464_P001	Maize	cytosol, nucleus, plasma membrane	48.28	56.57
TraesCS4A01G474000.2	Wheat	cytosol, mitochondrion, nucleus	40.95	55.88
HORVU7Hr1G001910.1	Barley	cytosol, mitochondrion, nucleus	39.66	54.44
EER92150	Sorghum	cytosol, nucleus, plasma membrane	45.69	53.54
Solyc07g041980.2.1	Tomato	cytosol, nucleus, plastid	33.62	37.32
CDY51840	Canola	plastid	15.95	34.26
KRH47625	Soybean	cytosol	21.98	32.08
KRH02600	Soybean	plastid	28.02	28.51
VIT_11s0016g00940.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	18.53	28.1
KRH19328	Soybean	plastid	28.45	28.09
AT5G20635.1	Thale cress	cytosol	30.17	27.89
CDX70936	Canola	plastid	28.45	27.73
KRH37500	Soybean	plastid	24.57	26.27
CDY45076	Canola	cytosol, nucleus, plasma membrane, plastid	28.02	26.21
CDY16550	Canola	cytosol	29.31	26.15
CDX92447	Canola	cytosol	29.31	26.15
KRH12546	Soybean	plastid	22.41	24.19
GSMUA_Achr5P05230_001	Banana	cytosol, nucleus, plasma membrane, plastid	33.19	22.38
GSMUA_Achr9P14410_001	Banana	cytosol, nucleus, plasma membrane, plastid	33.19	22.32
Os09t0441900-01	Rice	cytosol	32.76	17.84
GSMUA_Achr3P05970_001	Banana	plasma membrane	33.62	16.81

Protein Annotations

MapMan:27.6.2.3	EntrezGene:9269602	ProteinID:BAH89189.1	ProteinID:BAH89190.1	ProteinID:BAH89192.1	ProteinID:BAH89193.1
ProteinID:BAH89195.1	ProteinID:BAH89196.1	ProteinID:BAH89216.1	ProteinID:BAH89217.1	ProteinID:BAH89218.1	ProteinID:BAH89219.1
ProteinID:BAH89220.1	ProteinID:BAH89221.1	ProteinID:BAH89222.1	ProteinID:BAH89238.1	ProteinID:BAH89240.1	ProteinID:BAS84642.1
UniProt:C6L686	InterPro:G-protein_gamma-like_dom	GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005834	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	InterPro:IPR015898	EnsemblPlantsGene:Os03g0407400	EnsemblPlants:Os03t0407400-00
PFAM:PF00631	PANTHER:PTHR32378	PANTHER:PTHR32378:SF7	SMART:SM01224	UniParc:UPI000069231F	RefSeq:XP_015630072.1
SEG:seg	:	:	:	:	:

Description

LONG KERNEL 3Similar to Grain length and weight protein. (Os03t0407400-00)

Coordinates

chr3:-:16729501..16735109

Molecular Weight (calculated)

24337.5 Da

IEP (calculated)

8.127

GRAVY (calculated)

0.035

Length

232 amino acids

Sequence
(BLAST)

001: MAMAAAPRPK SPPAPPDPCG RHRLQLAVDA LHREIGFLEG EINSIEGIHA ASRCCREVDE FIGRTPDPFI TISSEKRSHD HSHHFLKKFR CLCRASACCL
101: SYLSWICCCS SAAGGCSSSS SSSFNLKRPS CCCNCNCNCC SSSSSSCGAA LTKSPCRCRR RSCCCRRCCC GGVGVRACAS CSCSPPCACC APPCAGCSCR
201: CTCPCPCPGG CSCACPACRC CCGVPRCCPP CL

Best Arabidopsis Sequence Match ( AT5G20635.1 )
(BLAST)

001: MSAPSGGGEG GGKESAAGGV SSSSLAPSSL PPPRPKSPPE YPDLYGKRRE AARVQMLERE IGFLEGEIKF IEGVQPASRC IKEVSDFVVA NSDPLIPAQR
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F

Arabidopsis Description

GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.