CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92447	Canola	cytosol	96.15	96.15
CDY51840	Canola	plastid	34.23	82.41
AT5G20635.1	Thale cress	cytosol	76.15	78.88
CDY45076	Canola	cytosol, nucleus, plasma membrane, plastid	66.92	70.16
CDX70936	Canola	plastid	60.38	65.97
VIT_11s0016g00940.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	28.08	47.71
Solyc07g041980.2.1	Tomato	cytosol, nucleus, plastid	38.08	47.37
KRH02600	Soybean	plastid	40.77	46.49
KRH19328	Soybean	plastid	40.0	44.26
GSMUA_Achr8P30570_001	Banana	cytosol, plastid	17.69	44.23
KRH37500	Soybean	plastid	34.62	41.47
KRH12546	Soybean	plastid	33.85	40.93
HORVU7Hr1G001910.1	Barley	cytosol, mitochondrion, nucleus	21.54	33.14
TraesCS7D01G015000.1	Wheat	cytosol, mitochondrion, nucleus	20.77	31.95
TraesCS7A01G017700.1	Wheat	cytosol, mitochondrion, nucleus	20.77	31.95
TraesCS4A01G474000.2	Wheat	cytosol, mitochondrion, nucleus	20.77	31.76
Zm00001d029464_P001	Maize	cytosol, nucleus, plasma membrane	23.85	31.31
EER92150	Sorghum	cytosol, nucleus, plasma membrane	23.85	31.31
Os03t0407400-00	Rice	cytosol	26.15	29.31
HORVU3Hr1G051800.3	Barley	cytosol, nucleus, plasma membrane	30.0	26.44
TraesCS5B01G208700.1	Wheat	cytosol, nucleus, plasma membrane	28.85	26.32
TraesCS5D01G216900.1	Wheat	cytosol, nucleus, plasma membrane	29.62	25.75
TraesCS5A01G215100.1	Wheat	cytosol	30.0	25.57
EES13964	Sorghum	cytosol	27.69	24.83
GSMUA_Achr5P05230_001	Banana	cytosol, nucleus, plasma membrane, plastid	30.38	22.97
GSMUA_Achr9P14410_001	Banana	cytosol, nucleus, plasma membrane, plastid	30.38	22.9
HORVU5Hr1G061840.1	Barley	extracellular, plasma membrane	24.62	22.15
Os09t0441900-01	Rice	cytosol	33.46	20.42
EER96796	Sorghum	cytosol	29.23	19.0
GSMUA_Achr3P05970_001	Banana	plasma membrane	30.0	16.81
Zm00001d005824_P001	Maize	cytosol	17.31	11.6
Zm00001d020629_P001	Maize	cytosol	16.54	8.88

Protein Annotations

MapMan:35.1	GO:A0A078FQ36	UniProt:A0A078FQ36	EnsemblPlants:CDY16550	ProteinID:CDY16550	ProteinID:CDY16550.1
InterPro:G-protein_gamma-like_dom	GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005834	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	EnsemblPlantsGene:GSBRNA2T00094332001	InterPro:IPR015898	PFAM:PF00631	PANTHER:PTHR32378
PANTHER:PTHR32378:SF9	UniParc:UPI0004EE39DE	SEG:seg	:	:	:

Description

BnaC09g37230DBnaC09g37230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQ36]

Coordinates

chrLK032065:-:90223..93008

Molecular Weight (calculated)

28483.7 Da

IEP (calculated)

8.186

GRAVY (calculated)

-0.107

Length

260 amino acids

Sequence
(BLAST)

001: MASTSGSVGG EVTGETGSPL AKPSLPPPRP KSPPEYPDLY GKRREAARVQ MLEREIGYLE AKVVDLLNLG SYYIQQGENK FIEGAQPASR CCKEVSDFVV
101: ANSDPLIPAQ RKNRRHCRFW KWLCCVPCLS LASFCCCCQS ECSCHLRKPK CCNFTSCCCV GSKCCDGSCC SNICCCPKPS CPSCSCFRGC CCSCPDLACC
201: IPTCFRSCSR PSCLNKKKSS CCSCNCKIRW SSCCRCPNVR LCCCFCNCKN LCSNPCCLTF

Best Arabidopsis Sequence Match ( AT5G20635.1 )
(BLAST)

001: MSAPSGGGEG GGKESAAGGV SSSSLAPSSL PPPRPKSPPE YPDLYGKRRE AARVQMLERE IGFLEGEIKF IEGVQPASRC IKEVSDFVVA NSDPLIPAQR
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F

Arabidopsis Description

GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.