Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G216900.1 | Wheat | cytosol, nucleus, plasma membrane | 96.49 | 91.97 |
| HORVU3Hr1G051800.3 | Barley | cytosol, nucleus, plasma membrane | 94.39 | 91.19 |
| TraesCS5A01G215100.1 | Wheat | cytosol | 96.49 | 90.16 |
| HORVU5Hr1G061840.1 | Barley | extracellular, plasma membrane | 82.46 | 81.31 |
| Os09t0441900-01 | Rice | cytosol | 72.98 | 48.83 |
| EER96796 | Sorghum | cytosol | 65.96 | 47.0 |
| Solyc07g041980.2.1 | Tomato | cytosol, nucleus, plastid | 27.72 | 37.8 |
| CDY51840 | Canola | plastid | 13.33 | 35.19 |
| GSMUA_Achr9P14410_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 41.75 | 34.49 |
| KRH02600 | Soybean | plastid | 26.32 | 32.89 |
| KRH19328 | Soybean | plastid | 25.61 | 31.06 |
| VIT_11s0016g00940.t01 | Wine grape | cytosol, endoplasmic reticulum, plasma membrane | 16.14 | 30.07 |
| AT5G20635.1 | Thale cress | cytosol | 25.96 | 29.48 |
| CDX70936 | Canola | plastid | 24.56 | 29.41 |
| KRH47625 | Soybean | cytosol | 16.14 | 28.93 |
| CDY16550 | Canola | cytosol | 26.32 | 28.85 |
| CDX92447 | Canola | cytosol | 26.32 | 28.85 |
| GSMUA_Achr5P05230_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 34.74 | 28.78 |
| GSMUA_Achr3P05970_001 | Banana | plasma membrane | 45.61 | 28.02 |
| CDY45076 | Canola | cytosol, nucleus, plasma membrane, plastid | 24.21 | 27.82 |
| KRH37500 | Soybean | plastid | 20.35 | 26.73 |
| KRH12546 | Soybean | plastid | 20.0 | 26.51 |
| Zm00001d005824_P001 | Maize | cytosol | 22.46 | 16.49 |
| Zm00001d020629_P001 | Maize | cytosol | 19.65 | 11.57 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G208700.1 | EnsemblPlantsGene:TraesCS5B01G208700 | ncoils:Coil | PANTHER:PTHR32378 | PANTHER:PTHR32378:SF9 | SEG:seg |
| SMART:SM01224 | MapMan:27.6.2.3 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:378517446..378520474
Molecular Weight (calculated)
30698.4 Da
IEP (calculated)
7.869
GRAVY (calculated)
-0.079
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEGAVVVLE APKPRSPPRY PDMCGRRRLQ LEVQILDREL TFLKDELHLL EGAQPVSRSG CLKEVNEFVG TKQDPLIPIN KRKHRSCRLY WWIRSKLCIC
101: ASWLCCSCQC LPTCKRPRCF DCSCCEPNCS CCSLNCCSCF SIPSCCKPSC GCFECCSCSK PQCCSSGCNP CGECKPECGS CSGGGCCGEQ CCSCPRCTGC
201: FSCFKVPKCS CAQCFNCQSS CCKGQPSCFR CQSSCCDKGG CCSGGSCLSC PKPSCPECSC GCVWSCKNCT DGCRCARCCA GGCLC
101: ASWLCCSCQC LPTCKRPRCF DCSCCEPNCS CCSLNCCSCF SIPSCCKPSC GCFECCSCSK PQCCSSGCNP CGECKPECGS CSGGGCCGEQ CCSCPRCTGC
201: FSCFKVPKCS CAQCFNCQSS CCKGQPSCFR CQSSCCDKGG CCSGGSCLSC PKPSCPECSC GCVWSCKNCT DGCRCARCCA GGCLC
001: MSAPSGGGEG GGKESAAGGV SSSSLAPSSL PPPRPKSPPE YPDLYGKRRE AARVQMLERE IGFLEGEIKF IEGVQPASRC IKEVSDFVVA NSDPLIPAQR
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F
Arabidopsis Description
GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.