Factsheet for Solyc07g041980.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
cytosol 1
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51840	Canola	plastid	27.75	53.7
VIT_11s0016g00940.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	38.76	52.94
KRH02600	Soybean	plastid	51.2	46.93
KRH19328	Soybean	plastid	50.24	44.68
KRH37500	Soybean	plastid	44.98	43.32
GSMUA_Achr8P30570_001	Banana	cytosol, plastid	21.53	43.27
KRH12546	Soybean	plastid	43.06	41.86
AT5G20635.1	Thale cress	cytosol	48.8	40.64
CDX70936	Canola	plastid	45.93	40.34
CDY45076	Canola	cytosol, nucleus, plasma membrane, plastid	45.45	38.31
CDX92447	Canola	cytosol	47.37	38.08
CDY16550	Canola	cytosol	47.37	38.08
EER92150	Sorghum	cytosol, nucleus, plasma membrane	35.89	37.88
HORVU7Hr1G001910.1	Barley	cytosol, mitochondrion, nucleus	28.23	34.91
Zm00001d029464_P001	Maize	cytosol, nucleus, plasma membrane	32.54	34.34
Os03t0407400-00	Rice	cytosol	37.32	33.62
TraesCS4A01G474000.2	Wheat	cytosol, mitochondrion, nucleus	27.27	33.53
TraesCS7A01G017700.1	Wheat	cytosol, mitochondrion, nucleus	26.79	33.14
TraesCS7D01G015000.1	Wheat	cytosol, mitochondrion, nucleus	26.32	32.54
TraesCS5B01G208700.1	Wheat	cytosol, nucleus, plasma membrane	37.8	27.72
HORVU3Hr1G051800.3	Barley	cytosol, nucleus, plasma membrane	38.76	27.46
TraesCS5D01G216900.1	Wheat	cytosol, nucleus, plasma membrane	37.8	26.42
TraesCS5A01G215100.1	Wheat	cytosol	37.8	25.9
EES13964	Sorghum	cytosol	35.41	25.52
GSMUA_Achr9P14410_001	Banana	cytosol, nucleus, plasma membrane, plastid	42.11	25.51
GSMUA_Achr5P05230_001	Banana	cytosol, nucleus, plasma membrane, plastid	37.8	22.97
HORVU5Hr1G061840.1	Barley	extracellular, plasma membrane	31.58	22.84
EER96796	Sorghum	cytosol	40.19	21.0
Os09t0441900-01	Rice	cytosol	40.67	19.95
GSMUA_Achr3P05970_001	Banana	plasma membrane	41.63	18.75
Zm00001d005824_P001	Maize	cytosol	23.92	12.89
Zm00001d020629_P001	Maize	cytosol	21.53	9.3

Protein Annotations

MapMan:27.6.2.3	ncoils:Coil	InterPro:G-protein_gamma-like_dom	GO:GO:0003674	GO:GO:0004871	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005834	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165
GO:GO:0007186	GO:GO:0008150	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0016020
InterPro:IPR015898	UniProt:K4CE63	PFAM:PF00631	PANTHER:PTHR32378	SMART:SM01224	EnsemblPlantsGene:Solyc07g041980.2
EnsemblPlants:Solyc07g041980.2.1	UniParc:UPI000276BC0B	SEG:seg	:	:	:

Description

Guanine nucleotide-binding protein subunit gamma 3 [Source:Projected from Arabidopsis thaliana (AT5G20635) UniProtKB/Swiss-Prot;Acc:Q6AWT8]

Coordinates

chr7:-:54766337..54770488

Molecular Weight (calculated)

23518.1 Da

IEP (calculated)

8.282

GRAVY (calculated)

-0.134

Length

209 amino acids

Sequence
(BLAST)

001: MAGAGSMPSM PPPRPKSPPQ YPDLYGKRRE FAKVQMLERE IGFLEEELKS IEGLHPASRS CKEVTEFVLE HSDPLIPTIK KTRRSRCFWK WLCGSSCFNL
101: SWICCWCRCP SMKMPNCCCN CNLCNCCPSI SCSIPKCCCQ CFSCPRSKCC RKPVCKWSCC SLKCPSCFSC SSCSNPCTCT CSCSYPRCPK LNCTSCCKKC
201: CCFCPCYLC

Best Arabidopsis Sequence Match ( AT5G20635.1 )
(BLAST)

001: MSAPSGGGEG GGKESAAGGV SSSSLAPSSL PPPRPKSPPE YPDLYGKRRE AARVQMLERE IGFLEGEIKF IEGVQPASRC IKEVSDFVVA NSDPLIPAQR
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F

Arabidopsis Description

GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.