Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G474000.2 | Wheat | cytosol, mitochondrion, nucleus | 88.76 | 88.24 |
| HORVU7Hr1G001910.1 | Barley | cytosol, mitochondrion, nucleus | 86.98 | 86.98 |
| Zm00001d029464_P001 | Maize | cytosol, nucleus, plasma membrane | 53.25 | 45.45 |
| Os03t0407400-00 | Rice | cytosol | 57.4 | 41.81 |
| EER92150 | Sorghum | cytosol, nucleus, plasma membrane | 47.34 | 40.4 |
| CDY51840 | Canola | plastid | 19.53 | 30.56 |
| KRH47625 | Soybean | cytosol | 25.44 | 27.04 |
| Solyc07g041980.2.1 | Tomato | cytosol, nucleus, plastid | 32.54 | 26.32 |
| VIT_11s0016g00940.t01 | Wine grape | cytosol, endoplasmic reticulum, plasma membrane | 23.08 | 25.49 |
| KRH02600 | Soybean | plastid | 31.95 | 23.68 |
| KRH19328 | Soybean | plastid | 32.54 | 23.4 |
| KRH12546 | Soybean | plastid | 28.99 | 22.79 |
| CDX70936 | Canola | plastid | 30.77 | 21.85 |
| KRH37500 | Soybean | plastid | 27.81 | 21.66 |
| AT5G20635.1 | Thale cress | cytosol | 31.95 | 21.51 |
| CDY45076 | Canola | cytosol, nucleus, plasma membrane, plastid | 31.36 | 21.37 |
| CDX92447 | Canola | cytosol | 32.54 | 21.15 |
| CDY16550 | Canola | cytosol | 31.95 | 20.77 |
| TraesCS5D01G216900.1 | Wheat | cytosol, nucleus, plasma membrane | 34.91 | 19.73 |
| GSMUA_Achr5P05230_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 36.09 | 17.73 |
| GSMUA_Achr9P14410_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 35.5 | 17.39 |
| GSMUA_Achr3P05970_001 | Banana | plasma membrane | 35.5 | 12.93 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G015000.1 | EnsemblPlantsGene:TraesCS7D01G015000 | PANTHER:PTHR32378 | PANTHER:PTHR32378:SF7 | SEG:seg | SMART:SM01224 |
| MapMan:27.6.2.3 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:6483394..6485745
Molecular Weight (calculated)
17260.9 Da
IEP (calculated)
7.932
GRAVY (calculated)
0.091
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPRPKSPL DPCGRHRLQL AVDALHRQIS FLEGEISSIE GLHAASICCK EVDEFIGKNA DPFITISSEK GNADQSHRFP KKIRTRWACL SCFPWICGGG
101: CSAVQLKGPS CCCGCPRCCV GSGGCGGGPS CGCSCSCAGC SSSCACPACA GCGAACCGGA PRPRCCLCS
101: CSAVQLKGPS CCCGCPRCCV GSGGCGGGPS CGCSCSCAGC SSSCACPACA GCGAACCGGA PRPRCCLCS
001: MSAPSGGGEG GGKESAAGGV SSSSLAPSSL PPPRPKSPPE YPDLYGKRRE AARVQMLERE IGFLEGEIKF IEGVQPASRC IKEVSDFVVA NSDPLIPAQR
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F
Arabidopsis Description
GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.