CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37500	Soybean	plastid	67.91	67.28
KRH19328	Soybean	plastid	56.28	51.49
KRH02600	Soybean	plastid	53.02	50.0
CDY51840	Canola	plastid	23.72	47.22
VIT_11s0016g00940.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	32.09	45.1
GSMUA_Achr8P30570_001	Banana	cytosol, plastid	21.4	44.23
Solyc07g041980.2.1	Tomato	cytosol, nucleus, plastid	41.86	43.06
KRH47625	Soybean	cytosol	26.51	35.85
CDX70936	Canola	plastid	39.53	35.71
CDY45076	Canola	cytosol, nucleus, plasma membrane, plastid	40.0	34.68
AT5G20635.1	Thale cress	cytosol	40.47	34.66
CDY16550	Canola	cytosol	40.93	33.85
CDX92447	Canola	cytosol	40.93	33.85
TraesCS4A01G474000.2	Wheat	cytosol, mitochondrion, nucleus	24.19	30.59
TraesCS7A01G017700.1	Wheat	cytosol, mitochondrion, nucleus	23.26	29.59
HORVU7Hr1G001910.1	Barley	cytosol, mitochondrion, nucleus	23.26	29.59
TraesCS7D01G015000.1	Wheat	cytosol, mitochondrion, nucleus	22.79	28.99
EER92150	Sorghum	cytosol, nucleus, plasma membrane	25.12	27.27
Zm00001d029464_P001	Maize	cytosol, nucleus, plasma membrane	22.33	24.24
GSMUA_Achr9P14410_001	Banana	cytosol, nucleus, plasma membrane, plastid	36.28	22.61
Os03t0407400-00	Rice	cytosol	24.19	22.41
GSMUA_Achr5P05230_001	Banana	cytosol, nucleus, plasma membrane, plastid	32.56	20.35
EES13964	Sorghum	cytosol	27.44	20.34
TraesCS5B01G208700.1	Wheat	cytosol, nucleus, plasma membrane	26.51	20.0
HORVU3Hr1G051800.3	Barley	cytosol, nucleus, plasma membrane	26.98	19.66
TraesCS5D01G216900.1	Wheat	cytosol, nucleus, plasma membrane	26.51	19.06
TraesCS5A01G215100.1	Wheat	cytosol	26.98	19.02
EER96796	Sorghum	cytosol	31.63	17.0
HORVU5Hr1G061840.1	Barley	extracellular, plasma membrane	22.79	16.95
GSMUA_Achr3P05970_001	Banana	plasma membrane	34.88	16.16
Os09t0441900-01	Rice	cytosol	30.7	15.49
Zm00001d005824_P001	Maize	cytosol	16.28	9.02
Zm00001d020629_P001	Maize	cytosol	14.42	6.4

Protein Annotations

EntrezGene:100784824	MapMan:27.6.2.3	EMBL:ACUP02009337	EMBL:ACUP02009338	ncoils:Coil	InterPro:G-protein_gamma-like_dom
EnsemblPlantsGene:GLYMA_15G178100	GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005834	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	InterPro:IPR015898	UniProt:K7MC40	EnsemblPlants:KRH12546	ProteinID:KRH12546
ProteinID:KRH12546.1	PFAM:PF00631	PANTHER:PTHR32378	PANTHER:PTHR32378:SF9	SMART:SM01224	UniParc:UPI000296B9BF
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:16972445..16975065

Molecular Weight (calculated)

23757.6 Da

IEP (calculated)

7.818

GRAVY (calculated)

-0.244

Length

215 amino acids

Sequence
(BLAST)

001: MSTPTRGTSN TLLSLPLPSP TPKAPSGYPD LYRKRRETAK IQMLEREISF LEEELKSSEG LQPASRCCKE IADFVMANSD PLLPTSKKNH QSCSLWKWLC
101: DIPCFNLSWI CHWCCDGCFE HQNLSSCCSH GKPCNCCSSC LPSTNCSCCS NGRSHCCKDS CGCKNCCTLP SCNFGWPFPS CCICKCSCSC SCPKCPKVRP
201: CCCCTNCCWN PCSCF

Best Arabidopsis Sequence Match ( AT5G20635.1 )
(BLAST)

001: MSAPSGGGEG GGKESAAGGV SSSSLAPSSL PPPRPKSPPE YPDLYGKRRE AARVQMLERE IGFLEGEIKF IEGVQPASRC IKEVSDFVVA NSDPLIPAQR
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F

Arabidopsis Description

GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.