CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
plasma membrane 2
golgi 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029464_P001	Maize	cytosol, nucleus, plasma membrane	64.65	64.65
TraesCS7D01G015000.1	Wheat	cytosol, mitochondrion, nucleus	40.4	47.34
TraesCS4A01G474000.2	Wheat	cytosol, mitochondrion, nucleus	39.9	46.47
TraesCS7A01G017700.1	Wheat	cytosol, mitochondrion, nucleus	39.39	46.15
Os03t0407400-00	Rice	cytosol	53.54	45.69
HORVU7Hr1G001910.1	Barley	cytosol, mitochondrion, nucleus	38.38	44.97
CDY51840	Canola	plastid	19.7	36.11
Solyc07g041980.2.1	Tomato	cytosol, nucleus, plastid	37.88	35.89
KRH02600	Soybean	plastid	33.33	28.95
KRH47625	Soybean	cytosol	22.22	27.67
KRH19328	Soybean	plastid	32.83	27.66
CDX70936	Canola	plastid	32.32	26.89
KRH37500	Soybean	plastid	28.28	25.81
AT5G20635.1	Thale cress	cytosol	32.32	25.5
VIT_11s0016g00940.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	19.7	25.49
KRH12546	Soybean	plastid	27.27	25.12
CDY16550	Canola	cytosol	31.31	23.85
CDX92447	Canola	cytosol	31.31	23.85
CDY45076	Canola	cytosol, nucleus, plasma membrane, plastid	28.28	22.58
EES13964	Sorghum	cytosol	31.31	21.38
GSMUA_Achr9P14410_001	Banana	cytosol, nucleus, plasma membrane, plastid	35.86	20.58
GSMUA_Achr5P05230_001	Banana	cytosol, nucleus, plasma membrane, plastid	33.33	19.19
EER96796	Sorghum	cytosol	33.33	16.5
GSMUA_Achr3P05970_001	Banana	plasma membrane	33.33	14.22

Protein Annotations

MapMan:27.6.2.3	EntrezGene:8080425	UniProt:C5WWP2	ncoils:Coil	EnsemblPlants:EER92150	ProteinID:EER92150
ProteinID:EER92150.1	InterPro:G-protein_gamma-like_dom	GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005834	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	InterPro:IPR015898	PFAM:PF00631	PANTHER:PTHR32378
PANTHER:PTHR32378:SF7	SMART:SM01224	EnsemblPlantsGene:SORBI_3001G341700	UniParc:UPI0001A8216A	RefSeq:XP_002465152.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:62910779..62916258

Molecular Weight (calculated)

20839.4 Da

IEP (calculated)

8.059

GRAVY (calculated)

0.009

Length

198 amino acids

Sequence
(BLAST)

001: MAAAPRPKSP PASPDPCGRH RLQLAVDALH REISFLEGEI SSIEGVHAAS RCCKEVDEFV GSNPDPFLTI QPEKGSHDQS QQFLKKFRAK SCLSYYLSWI
101: CCCGGGGGGG SGGWCPPSLQ LKRPAAPSCS CAPRLRKLCC CCCCCRCRVV YAGGAGGCGC CAPCPRCSCD CTCACPRCCS CPRCSAACCC APRCCLCL

Best Arabidopsis Sequence Match ( AT5G20635.1 )
(BLAST)

001: MSAPSGGGEG GGKESAAGGV SSSSLAPSSL PPPRPKSPPE YPDLYGKRRE AARVQMLERE IGFLEGEIKF IEGVQPASRC IKEVSDFVVA NSDPLIPAQR
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F

Arabidopsis Description

GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.