Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 2
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P30570_001 | Banana | cytosol, plastid | 13.08 | 43.27 |
| GSMUA_Achr9P14410_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 41.28 | 41.16 |
| CDY51840 | Canola | plastid | 11.92 | 37.96 |
| Solyc07g041980.2.1 | Tomato | cytosol, nucleus, plastid | 22.97 | 37.8 |
| KRH02600 | Soybean | plastid | 24.71 | 37.28 |
| TraesCS7A01G017700.1 | Wheat | cytosol, mitochondrion, nucleus | 18.02 | 36.69 |
| KRH19328 | Soybean | plastid | 25.0 | 36.6 |
| TraesCS7D01G015000.1 | Wheat | cytosol, mitochondrion, nucleus | 17.73 | 36.09 |
| HORVU7Hr1G001910.1 | Barley | cytosol, mitochondrion, nucleus | 17.44 | 35.5 |
| TraesCS4A01G474000.2 | Wheat | cytosol, mitochondrion, nucleus | 17.44 | 35.29 |
| HORVU3Hr1G051800.3 | Barley | cytosol, nucleus, plasma membrane | 30.23 | 35.25 |
| Zm00001d029464_P001 | Maize | cytosol, nucleus, plasma membrane | 20.06 | 34.85 |
| TraesCS5B01G208700.1 | Wheat | cytosol, nucleus, plasma membrane | 28.78 | 34.74 |
| TraesCS5D01G216900.1 | Wheat | cytosol, nucleus, plasma membrane | 29.94 | 34.45 |
| TraesCS5A01G215100.1 | Wheat | cytosol | 30.23 | 34.1 |
| VIT_11s0016g00940.t01 | Wine grape | cytosol, endoplasmic reticulum, plasma membrane | 15.12 | 33.99 |
| EES13964 | Sorghum | cytosol | 28.2 | 33.45 |
| EER92150 | Sorghum | cytosol, nucleus, plasma membrane | 19.19 | 33.33 |
| Os03t0407400-00 | Rice | cytosol | 22.38 | 33.19 |
| KRH12546 | Soybean | plastid | 20.35 | 32.56 |
| KRH37500 | Soybean | plastid | 19.77 | 31.34 |
| CDX92447 | Canola | cytosol | 23.55 | 31.15 |
| GSMUA_Achr3P05970_001 | Banana | plasma membrane | 41.57 | 30.82 |
| CDX70936 | Canola | plastid | 21.22 | 30.67 |
| CDY16550 | Canola | cytosol | 22.97 | 30.38 |
| AT5G20635.1 | Thale cress | cytosol | 22.09 | 30.28 |
| HORVU5Hr1G061840.1 | Barley | extracellular, plasma membrane | 25.0 | 29.76 |
| CDY45076 | Canola | cytosol, nucleus, plasma membrane, plastid | 20.64 | 28.63 |
| KRH47625 | Soybean | cytosol | 13.08 | 28.3 |
| EER96796 | Sorghum | cytosol | 32.27 | 27.75 |
| Os09t0441900-01 | Rice | cytosol | 29.65 | 23.94 |
| Zm00001d005824_P001 | Maize | cytosol | 15.99 | 14.18 |
| Zm00001d020629_P001 | Maize | cytosol | 15.41 | 10.95 |
Protein Annotations
| MapMan:27.6.2.3 | ncoils:Coil | InterPro:G-protein_gamma-like_dom | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005834 | GO:GO:0005886 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007186 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | EnsemblPlantsGene:GSMUA_Achr5G05230_001 | EnsemblPlants:GSMUA_Achr5P05230_001 |
| EnsemblPlants:GSMUA_Achr5T05230_001 | InterPro:IPR015898 | UniProt:M0SVV2 | PFAM:PF00631 | PANTHER:PTHR32378 | PANTHER:PTHR32378:SF9 |
| SMART:SM01224 | UniParc:UPI00029582A8 | SEG:seg | : | : | : |
Description
Putative DEP1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G05230_001]
Coordinates
chr5:+:3862904..3865739
Molecular Weight (calculated)
38098.0 Da
IEP (calculated)
8.072
GRAVY (calculated)
-0.206
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEPVPRAPQ PAAAVVVAPR PKSPPKYPDV CGRRRLQLEL HILNREIGFI EEELQSLEGI QPVSRCCKEV NEFVEMKPDP LMPINKRRHK SCCLWRWLRS
101: KLCLDFSWIC CLSWYILGLE RSNCSCPQNC SCCDYGCPCS ECCEGLTSRP CCCCSGIPCS CSKFPCSCIK TYFSCLKVPC GCSKKCNSCS KFSCSWGETC
201: CSCSKVSCSC SCSSLSCFRP QCSCWNASSS SPGCCKWWSS RFKPRCSSSC CDQPSCSDSC CNQPLCGSRR PSCCPQQWCC GCCRPQWCCA GRPPCFGSCC
301: FRDWCCSLRP SRPTTCCRLP NLSGPQCSCG CSWSCSKSTG GCLY
101: KLCLDFSWIC CLSWYILGLE RSNCSCPQNC SCCDYGCPCS ECCEGLTSRP CCCCSGIPCS CSKFPCSCIK TYFSCLKVPC GCSKKCNSCS KFSCSWGETC
201: CSCSKVSCSC SCSSLSCFRP QCSCWNASSS SPGCCKWWSS RFKPRCSSSC CDQPSCSDSC CNQPLCGSRR PSCCPQQWCC GCCRPQWCCA GRPPCFGSCC
301: FRDWCCSLRP SRPTTCCRLP NLSGPQCSCG CSWSCSKSTG GCLY
001: MSAPSGGGEG GGKESAAGGV SSSSLAPSSL PPPRPKSPPE YPDLYGKRRE AARVQMLERE IGFLEGEIKF IEGVQPASRC IKEVSDFVVA NSDPLIPAQR
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F
Arabidopsis Description
GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.