CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 1
cytosol 1
nucleus 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12546	Soybean	plastid	67.28	67.91
KRH02600	Soybean	plastid	53.92	51.32
KRH19328	Soybean	plastid	54.38	50.21
CDY51840	Canola	plastid	24.42	49.07
VIT_11s0016g00940.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	31.8	45.1
Solyc07g041980.2.1	Tomato	cytosol, nucleus, plastid	43.32	44.98
GSMUA_Achr8P30570_001	Banana	cytosol, plastid	20.74	43.27
CDY45076	Canola	cytosol, nucleus, plasma membrane, plastid	42.4	37.1
AT5G20635.1	Thale cress	cytosol	42.4	36.65
KRH47625	Soybean	cytosol	26.27	35.85
CDX70936	Canola	plastid	39.17	35.71
CDX92447	Canola	cytosol	41.47	34.62
CDY16550	Canola	cytosol	41.47	34.62
TraesCS4A01G474000.2	Wheat	cytosol, mitochondrion, nucleus	24.42	31.18
TraesCS7A01G017700.1	Wheat	cytosol, mitochondrion, nucleus	22.12	28.4
HORVU7Hr1G001910.1	Barley	cytosol, mitochondrion, nucleus	22.12	28.4
EER92150	Sorghum	cytosol, nucleus, plasma membrane	25.81	28.28
TraesCS7D01G015000.1	Wheat	cytosol, mitochondrion, nucleus	21.66	27.81
Zm00001d029464_P001	Maize	cytosol, nucleus, plasma membrane	23.96	26.26
Os03t0407400-00	Rice	cytosol	26.27	24.57
GSMUA_Achr9P14410_001	Banana	cytosol, nucleus, plasma membrane, plastid	35.02	22.03
EES13964	Sorghum	cytosol	28.11	21.03
TraesCS5B01G208700.1	Wheat	cytosol, nucleus, plasma membrane	26.73	20.35
HORVU3Hr1G051800.3	Barley	cytosol, nucleus, plasma membrane	27.19	20.0
GSMUA_Achr5P05230_001	Banana	cytosol, nucleus, plasma membrane, plastid	31.34	19.77
TraesCS5D01G216900.1	Wheat	cytosol, nucleus, plasma membrane	26.73	19.4
TraesCS5A01G215100.1	Wheat	cytosol	26.73	19.02
EER96796	Sorghum	cytosol	32.26	17.5
HORVU5Hr1G061840.1	Barley	extracellular, plasma membrane	22.58	16.95
GSMUA_Achr3P05970_001	Banana	plasma membrane	34.1	15.95
Os09t0441900-01	Rice	cytosol	30.88	15.73
Zm00001d005824_P001	Maize	cytosol	16.13	9.02
Zm00001d020629_P001	Maize	cytosol	14.29	6.4

Protein Annotations

EntrezGene:100817458	MapMan:27.6.2.3	EMBL:ACUP02005456	ncoils:Coil	InterPro:G-protein_gamma-like_dom	EnsemblPlantsGene:GLYMA_09G070100
GO:GO:0003674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005834	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	InterPro:IPR001368	InterPro:IPR015898	UniProt:K7LC96
EnsemblPlants:KRH37500	ProteinID:KRH37500	ProteinID:KRH37500.1	PFAM:PF00631	ScanProsite:PS00652	PANTHER:PTHR32378
PANTHER:PTHR32378:SF9	SMART:SM01224	InterPro:TNFR/NGFR_Cys_rich_reg	UniParc:UPI000233D07A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:7152092..7154977

Molecular Weight (calculated)

23958.1 Da

IEP (calculated)

7.745

GRAVY (calculated)

-0.092

Length

217 amino acids

Sequence
(BLAST)

001: MSTSTRATSN ILLSLPLPSP KAAPPSCPDL YGKRREMAKI QMLEREISFL EEELKSSEGL QPASRCCKEI ADFVMANSDP LLPTSKKNHR SCSFWKWLCD
101: IPCFNLSWIC HWCCDGCFEH QNMSSCCSHC MPCNCCSSCL PSTNCSCCPN GISHCCKDSC GCKICCTLPS CNIGWPFPSC CICKCSCSCS WSGPKKCPKV
201: RPCCCCTNSC WNPCSCF

Best Arabidopsis Sequence Match ( AT5G20635.1 )
(BLAST)

001: MSAPSGGGEG GGKESAAGGV SSSSLAPSSL PPPRPKSPPE YPDLYGKRRE AARVQMLERE IGFLEGEIKF IEGVQPASRC IKEVSDFVVA NSDPLIPAQR
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F

Arabidopsis Description

GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.