CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G216900.1	Wheat	cytosol, nucleus, plasma membrane	50.0	66.89
HORVU3Hr1G051800.3	Barley	cytosol, nucleus, plasma membrane	49.25	66.78
TraesCS5B01G208700.1	Wheat	cytosol, nucleus, plasma membrane	47.0	65.96
TraesCS5A01G215100.1	Wheat	cytosol	49.75	65.25
HORVU5Hr1G061840.1	Barley	extracellular, plasma membrane	43.0	59.52
Os09t0441900-01	Rice	cytosol	62.25	58.45
EES13964	Sorghum	cytosol	35.75	49.31
Solyc07g041980.2.1	Tomato	cytosol, nucleus, plastid	21.0	40.19
CDY51840	Canola	plastid	10.5	38.89
GSMUA_Achr9P14410_001	Banana	cytosol, nucleus, plasma membrane, plastid	31.5	36.52
VIT_11s0016g00940.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	13.0	33.99
KRH02600	Soybean	plastid	19.25	33.77
EER92150	Sorghum	cytosol, nucleus, plasma membrane	16.5	33.33
GSMUA_Achr5P05230_001	Banana	cytosol, nucleus, plasma membrane, plastid	27.75	32.27
KRH37500	Soybean	plastid	17.5	32.26
KRH47625	Soybean	cytosol	12.75	32.08
CDX70936	Canola	plastid	19.0	31.93
KRH19328	Soybean	plastid	18.75	31.91
AT5G20635.1	Thale cress	cytosol	20.0	31.87
KRH12546	Soybean	plastid	17.0	31.63
CDY45076	Canola	cytosol, nucleus, plasma membrane, plastid	19.25	31.05
CDX92447	Canola	cytosol	20.0	30.77
CDY16550	Canola	cytosol	19.0	29.23
GSMUA_Achr3P05970_001	Banana	plasma membrane	33.75	29.09
Zm00001d005824_P001	Maize	cytosol	17.5	18.04
Zm00001d020629_P001	Maize	cytosol	17.0	14.05

Protein Annotations

MapMan:27.6.2.3	EntrezGene:8062748	UniProt:C5XDQ6	ncoils:Coil	EnsemblPlants:EER96796	ProteinID:EER96796
ProteinID:EER96796.1	InterPro:G-protein_gamma-like_dom	GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005834	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	InterPro:IPR015898	PFAM:PF00631	PANTHER:PTHR32378
PANTHER:PTHR32378:SF9	SMART:SM01224	EnsemblPlantsGene:SORBI_3002G216600	UniParc:UPI0001A83528	RefSeq:XP_002460275.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:60869170..60876291

Molecular Weight (calculated)

42842.0 Da

IEP (calculated)

7.957

GRAVY (calculated)

-0.075

Length

400 amino acids

Sequence
(BLAST)

001: MGEEVAAAAA VVLEPPRPKS PPRYPDLCGR RRLQLELQIL NREIDFLKDE LQSLEGVPPV SRSCKEVNEF VGTKQDPLLP IKKKTHRSCR LFWWIRSKLC
101: ICVSWFCCSC HCLPNCKRPC CLDCSCCSCP DLSCCKPSCK SCNKPCSWPN SCSCCDTPCC KPDCPSCSSS CSSCCNLSCC NPNCSSCCTC NPSCCKPNCN
201: SCCRPNCSSC CNPSCCKPNC GSWWKPSCSC FKAPSCCKLQ CSPNCCTCSL PRCSGCNPCG SCKQCCSCPT DCCNCKPSCG CFSAQCCSCA ACCSSCLSCF
301: SCFGCFKSFK CSNLFGCCSC KQCFKCQSSC CKGAPSCCKC QSSCCEGEDG SSCCRRSCCS VPKPACPGCS CGCVWSCKKC TDGCRCSGCR NPCCATGCLC

Best Arabidopsis Sequence Match ( AT5G20635.1 )
(BLAST)

001: MSAPSGGGEG GGKESAAGGV SSSSLAPSSL PPPRPKSPPE YPDLYGKRRE AARVQMLERE IGFLEGEIKF IEGVQPASRC IKEVSDFVVA NSDPLIPAQR
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F

Arabidopsis Description

GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.