CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19328	Soybean	plastid	92.98	90.21
KRH37500	Soybean	plastid	51.32	53.92
KRH12546	Soybean	plastid	50.0	53.02
CDY51840	Canola	plastid	25.0	52.78
Solyc07g041980.2.1	Tomato	cytosol, nucleus, plastid	46.93	51.2
GSMUA_Achr8P30570_001	Banana	cytosol, plastid	22.37	49.04
VIT_11s0016g00940.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	32.46	48.37
AT5G20635.1	Thale cress	cytosol	46.93	42.63
CDX70936	Canola	plastid	43.86	42.02
CDY16550	Canola	cytosol	46.49	40.77
CDX92447	Canola	cytosol	46.49	40.77
CDY45076	Canola	cytosol, nucleus, plasma membrane, plastid	43.42	39.92
KRH47625	Soybean	cytosol	24.12	34.59
EER92150	Sorghum	cytosol, nucleus, plasma membrane	28.95	33.33
TraesCS4A01G474000.2	Wheat	cytosol, mitochondrion, nucleus	24.56	32.94
TraesCS7A01G017700.1	Wheat	cytosol, mitochondrion, nucleus	24.12	32.54
HORVU7Hr1G001910.1	Barley	cytosol, mitochondrion, nucleus	24.12	32.54
TraesCS7D01G015000.1	Wheat	cytosol, mitochondrion, nucleus	23.68	31.95
Zm00001d029464_P001	Maize	cytosol, nucleus, plasma membrane	26.75	30.81
Os03t0407400-00	Rice	cytosol	28.51	28.02
GSMUA_Achr9P14410_001	Banana	cytosol, nucleus, plasma membrane, plastid	40.35	26.67
TraesCS5B01G208700.1	Wheat	cytosol, nucleus, plasma membrane	32.89	26.32
HORVU3Hr1G051800.3	Barley	cytosol, nucleus, plasma membrane	33.33	25.76
EES13964	Sorghum	cytosol	31.58	24.83
TraesCS5D01G216900.1	Wheat	cytosol, nucleus, plasma membrane	32.46	24.75
GSMUA_Achr5P05230_001	Banana	cytosol, nucleus, plasma membrane, plastid	37.28	24.71
TraesCS5A01G215100.1	Wheat	cytosol	32.89	24.59
HORVU5Hr1G061840.1	Barley	extracellular, plasma membrane	25.88	20.42
GSMUA_Achr3P05970_001	Banana	plasma membrane	40.35	19.83
EER96796	Sorghum	cytosol	33.77	19.25
Os09t0441900-01	Rice	cytosol	35.96	19.25
Zm00001d005824_P001	Maize	cytosol	19.74	11.6
Zm00001d020629_P001	Maize	cytosol	17.54	8.26

Protein Annotations

EntrezGene:100783447	MapMan:27.6.2.3	EMBL:ACUP02010312	ncoils:Coil	InterPro:G-protein_gamma-like_dom	EnsemblPlantsGene:GLYMA_17G048600
GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005834
GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	EMBL:HM165474	UniProt:I1MSA0	InterPro:IPR015898	EnsemblPlants:KRH02600	ProteinID:KRH02600
ProteinID:KRH02600.1	PFAM:PF00631	PANTHER:PTHR32378	PANTHER:PTHR32378:SF9	SMART:SM01224	UniParc:UPI000233E547
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:3688017..3691527

Molecular Weight (calculated)

25065.8 Da

IEP (calculated)

8.024

GRAVY (calculated)

-0.068

Length

228 amino acids

Sequence
(BLAST)

001: MATTPTTVRS SSVPSLPPPS PKSPPEYPDL YGKRRETARV HMLEREITFL EEELKSVEGL QPASRCCKEI ADYVMANADP LLPSTKKNRR SCRFWKWLCG
101: MPCFNLSWIC CCCCCEGLSL QLKLPRCCCD CKPCSCSCSC LPPIKCCSLP KWSCCCSCPK SNCCKEGCGF GNCCTFPRSC NFGCPTCPSC PSCCSCKCTC
201: TCSCPSCPKV SPCCCCTKSC WRPCCFCC

Best Arabidopsis Sequence Match ( AT5G20635.2 )
(BLAST)

001: MMFLNQYFEC RYDQGEIKFI EGVQPASRCI KEVSDFVVAN SDPLIPAQRK SRRSFRFWKW LCGPCLSLVS FCCCCQSKCS CHLRKPKCCN CTSCSCIGSK
101: CCDGSCCSNI CCCPRLSCPS CSCFRGCWCS CPDMSCCIPS CFRSCSCTRP SCLNKKKSSC CSCNCKIRWS SCFSCPKVRL CSCCFCNCKN LCSNPCCLAF

Arabidopsis Description

GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [plasma membrane,extracellular,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.