CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51840	Canola	plastid	33.19	73.15
AT5G20635.1	Thale cress	cytosol	68.07	64.54
CDX92447	Canola	cytosol	69.33	63.46
CDY16550	Canola	cytosol	65.97	60.38
CDY45076	Canola	cytosol, nucleus, plasma membrane, plastid	62.18	59.68
VIT_11s0016g00940.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	29.83	46.41
Solyc07g041980.2.1	Tomato	cytosol, nucleus, plastid	40.34	45.93
KRH02600	Soybean	plastid	42.02	43.86
GSMUA_Achr8P30570_001	Banana	cytosol, plastid	18.91	43.27
KRH19328	Soybean	plastid	40.34	40.85
KRH12546	Soybean	plastid	35.71	39.53
KRH37500	Soybean	plastid	35.71	39.17
Zm00001d029464_P001	Maize	cytosol, nucleus, plasma membrane	28.15	33.84
TraesCS4A01G474000.2	Wheat	cytosol, mitochondrion, nucleus	23.53	32.94
EER92150	Sorghum	cytosol, nucleus, plasma membrane	26.89	32.32
HORVU7Hr1G001910.1	Barley	cytosol, mitochondrion, nucleus	22.27	31.36
TraesCS7D01G015000.1	Wheat	cytosol, mitochondrion, nucleus	21.85	30.77
TraesCS7A01G017700.1	Wheat	cytosol, mitochondrion, nucleus	21.85	30.77
Os03t0407400-00	Rice	cytosol	27.73	28.45
EES13964	Sorghum	cytosol	31.09	25.52
TraesCS5B01G208700.1	Wheat	cytosol, nucleus, plasma membrane	29.41	24.56
HORVU3Hr1G051800.3	Barley	cytosol, nucleus, plasma membrane	29.83	24.07
TraesCS5D01G216900.1	Wheat	cytosol, nucleus, plasma membrane	28.99	23.08
TraesCS5A01G215100.1	Wheat	cytosol	29.41	22.95
GSMUA_Achr9P14410_001	Banana	cytosol, nucleus, plasma membrane, plastid	31.93	22.03
GSMUA_Achr5P05230_001	Banana	cytosol, nucleus, plasma membrane, plastid	30.67	21.22
HORVU5Hr1G061840.1	Barley	extracellular, plasma membrane	23.53	19.38
EER96796	Sorghum	cytosol	31.93	19.0
Os09t0441900-01	Rice	cytosol	32.35	18.08
GSMUA_Achr3P05970_001	Banana	plasma membrane	33.61	17.24
Zm00001d005824_P001	Maize	cytosol	15.97	9.79
Zm00001d020629_P001	Maize	cytosol	14.29	7.02

Protein Annotations

MapMan:27.6.2.3	GO:A0A078C1Q3	EnsemblPlants:CDX70936	ProteinID:CDX70936	ProteinID:CDX70936.1	ncoils:Coil
InterPro:G-protein_gamma-like_dom	GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005834	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	EnsemblPlantsGene:GSBRNA2T00140847001	InterPro:IPR015898	PFAM:PF00631	PANTHER:PTHR32378
PANTHER:PTHR32378:SF9	SMART:SM01224	UniParc:UPI0004EDD42C	SEG:seg	:	:

Description

BnaC03g10200D

Coordinates

chrLK031791:-:2828470..2830817

Molecular Weight (calculated)

25882.6 Da

IEP (calculated)

8.239

GRAVY (calculated)

-0.092

Length

238 amino acids

Sequence
(BLAST)

001: MSAPSCSVGG EVGGETCSAL AKSSLPPPPR PKSPPEYPDL YGKRREAARV QMLEREIGFL EGEIKFIQGV QPASRCCKEV SDFVVANSDP LIPAQQKSQR
101: HGQFWKWLCC GIPCLSLASF FCCCRSNCSC HLRKPKCCNC TSCSCTGSKC CEGSCCSNSC CCPKLSCPSC SCFRGCCCSC PDLSCCLPTC LNKKKKSSCC
201: SCNCKIRWSS CFRCPKVQLC CCFRNCKNLC SNPCCLAF

Best Arabidopsis Sequence Match ( AT5G20635.1 )
(BLAST)

001: MSAPSGGGEG GGKESAAGGV SSSSLAPSSL PPPRPKSPPE YPDLYGKRRE AARVQMLERE IGFLEGEIKF IEGVQPASRC IKEVSDFVVA NSDPLIPAQR
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F

Arabidopsis Description

GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.