CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 1
cytosol 1
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51840	Canola	plastid	32.26	74.07
CDX92447	Canola	cytosol	72.18	68.85
CDY16550	Canola	cytosol	70.16	66.92
CDX70936	Canola	plastid	59.68	62.18
VIT_11s0016g00940.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	30.24	49.02
Solyc07g041980.2.1	Tomato	cytosol, nucleus, plastid	38.31	45.45
KRH02600	Soybean	plastid	39.92	43.42
KRH37500	Soybean	plastid	37.1	42.4
GSMUA_Achr8P30570_001	Banana	cytosol, plastid	17.74	42.31
KRH19328	Soybean	plastid	38.31	40.43
KRH12546	Soybean	plastid	34.68	40.0
TraesCS7D01G015000.1	Wheat	cytosol, mitochondrion, nucleus	21.37	31.36
TraesCS7A01G017700.1	Wheat	cytosol, mitochondrion, nucleus	21.37	31.36
TraesCS4A01G474000.2	Wheat	cytosol, mitochondrion, nucleus	21.37	31.18
HORVU7Hr1G001910.1	Barley	cytosol, mitochondrion, nucleus	20.97	30.77
Zm00001d029464_P001	Maize	cytosol, nucleus, plasma membrane	23.79	29.8
EER92150	Sorghum	cytosol, nucleus, plasma membrane	22.58	28.28
Os03t0407400-00	Rice	cytosol	26.21	28.02
EES13964	Sorghum	cytosol	30.24	25.86
TraesCS5B01G208700.1	Wheat	cytosol, nucleus, plasma membrane	27.82	24.21
HORVU3Hr1G051800.3	Barley	cytosol, nucleus, plasma membrane	28.63	24.07
TraesCS5A01G215100.1	Wheat	cytosol	28.63	23.28
TraesCS5D01G216900.1	Wheat	cytosol, nucleus, plasma membrane	27.82	23.08
GSMUA_Achr9P14410_001	Banana	cytosol, nucleus, plasma membrane, plastid	29.03	20.87
GSMUA_Achr5P05230_001	Banana	cytosol, nucleus, plasma membrane, plastid	28.63	20.64
HORVU5Hr1G061840.1	Barley	extracellular, plasma membrane	23.39	20.07
EER96796	Sorghum	cytosol	31.05	19.25
Os09t0441900-01	Rice	cytosol	32.66	19.01
GSMUA_Achr3P05970_001	Banana	plasma membrane	30.65	16.38
Zm00001d005824_P001	Maize	cytosol	17.74	11.34
Zm00001d020629_P001	Maize	cytosol	15.73	8.06

Protein Annotations

MapMan:27.6.2.3	GO:A0A078I5C1	UniProt:A0A078I5C1	EnsemblPlants:CDY45076	ProteinID:CDY45076	ProteinID:CDY45076.1
ncoils:Coil	InterPro:G-protein_gamma-like_dom	GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005834	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	EnsemblPlantsGene:GSBRNA2T00081353001	InterPro:IPR015898	PFAM:PF00631
PANTHER:PTHR32378	PANTHER:PTHR32378:SF9	SMART:SM01224	UniParc:UPI0004EF09CB	SEG:seg	:

Description

BnaA02g05000DBnaA02g05000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5C1]

Coordinates

chrLK032613:+:83403..86063

Molecular Weight (calculated)

27209.6 Da

IEP (calculated)

8.434

GRAVY (calculated)

-0.009

Length

248 amino acids

Sequence
(BLAST)

001: MASTSCSVKV AGETGLALAK SSLPPPRPKS PPPYPDLYGK RREAARVQML EREIGFLEAK IKFVEGLQPS SRCCKEVSDF VVANSDPMIP AQRKSRRHCR
101: FWKWLCFPCL SVASFCCCCR SECSCHLRKP KCCNSTCCSC VGSKCFNGSC CSNSCCCPKP SCPKCLSCPS CSCFRGCCCS CPDLCCCIPT CFRSCSRPSC
201: LNKKSSCCSC NCICKIKWSS CFKCPKLRLC CCFCNCKNTC SNPCCLAF

Best Arabidopsis Sequence Match ( AT5G20635.1 )
(BLAST)

001: MSAPSGGGEG GGKESAAGGV SSSSLAPSSL PPPRPKSPPE YPDLYGKRRE AARVQMLERE IGFLEGEIKF IEGVQPASRC IKEVSDFVVA NSDPLIPAQR
101: KSRRSFRFWK WLCGPCLSLV SFCCCCQSKC SCHLRKPKCC NCTSCSCIGS KCCDGSCCSN ICCCPRLSCP SCSCFRGCWC SCPDMSCCIP SCFRSCSCTR
201: PSCLNKKKSS CCSCNCKIRW SSCFSCPKVR LCSCCFCNCK NLCSNPCCLA F

Arabidopsis Description

GG3Guanine nucleotide-binding protein subunit gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.