Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G255300.1 | Wheat | cytosol | 78.14 | 89.84 |
| TraesCS5D01G264100.1 | Wheat | cytosol | 80.47 | 81.6 |
| TraesCS5A01G256000.1 | Wheat | cytosol | 77.67 | 81.46 |
| HORVU6Hr1G051470.1 | Barley | cytosol | 60.47 | 61.9 |
| Solyc07g056150.2.1 | Tomato | cytosol, nucleus | 59.07 | 59.91 |
| PGSC0003DMT400054721 | Potato | cytosol | 45.58 | 59.39 |
| VIT_00s1506g00010.t01 | Wine grape | cytosol | 40.0 | 57.72 |
| Os10t0208200-00 | Rice | cytosol | 53.02 | 53.77 |
| GSMUA_Achr4P01720_001 | Banana | endoplasmic reticulum, extracellular | 60.47 | 52.0 |
| HORVU3Hr1G010800.8 | Barley | cytosol | 30.23 | 39.88 |
| HORVU3Hr1G048090.1 | Barley | plasma membrane | 37.21 | 39.41 |
| HORVU1Hr1G001910.9 | Barley | endoplasmic reticulum | 39.07 | 37.33 |
| HORVU1Hr1G072070.1 | Barley | cytosol | 32.56 | 31.11 |
| HORVU3Hr1G010780.1 | Barley | plasma membrane | 38.14 | 29.39 |
| HORVU5Hr1G112790.2 | Barley | cytosol, extracellular | 32.56 | 27.03 |
| HORVU3Hr1G086830.7 | Barley | cytosol | 28.37 | 23.02 |
Protein Annotations
| MapMan:22.8.1.2 | Gene3D:3.40.50.300 | UniProt:A0A287RR06 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:HORVU5Hr1G071600 | EnsemblPlants:HORVU5Hr1G071600.3 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF843 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI000B46F981 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr5H:-:533354961..533356074
Molecular Weight (calculated)
24082.7 Da
IEP (calculated)
8.316
GRAVY (calculated)
-0.297
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: PAITRKYCLC QELPAGADRV GKSCLLLQFT DKRFQPVHDL TIGVEFGQRM VTIDKKKIRL QIWDTAGQEA FRSITKSYYR SAVAALLVYD ITRRETFNHV
101: ASWLEEMREQ ADGNNKITIM LVGNKSDLGQ RRAVSTEEGE QFAKENGLAF METSARTRHN VEEAFLQSSS MVYEKIQEGA IDLSKVSGVL HYSLGRVCGF
201: RSSSSSVSLS VSLAE
101: ASWLEEMREQ ADGNNKITIM LVGNKSDLGQ RRAVSTEEGE QFAKENGLAF METSARTRHN VEEAFLQSSS MVYEKIQEGA IDLSKVSGVL HYSLGRVCGF
201: RSSSSSVSLS VSLAE
001: MSYAYLFKYI IIGDTGVGKS CLLLQFTDKR FQPVHDLTIG VEFGARMITI DNKPIKLQIW DTAGQESFRS ITRSYYRGAA GALLVYDITR RETFNHLASW
101: LEDARQHANA NMTIMLIGNK CDLAHRRAVS TEEGEQFAKE HGLIFMEASA KTAQNVEEAF IKTAATIYKK IQDGVFDVSN ESYGIKVGYG GIPGPSGGRD
201: GSTSQGGGCC G
101: LEDARQHANA NMTIMLIGNK CDLAHRRAVS TEEGEQFAKE HGLIFMEASA KTAQNVEEAF IKTAATIYKK IQDGVFDVSN ESYGIKVGYG GIPGPSGGRD
201: GSTSQGGGCC G
Arabidopsis Description
RABB1CRABB1C [Source:UniProtKB/TrEMBL;Acc:A0A178V4V1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.