Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- endoplasmic reticulum 1
- golgi 1
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s1506g00010.t01 | Wine grape | cytosol | 85.45 | 94.63 |
| PGSC0003DMT400079822 | Potato | cytosol | 99.39 | 77.73 |
| Solyc07g056150.2.1 | Tomato | cytosol, nucleus | 99.39 | 77.36 |
| PGSC0003DMT400020113 | Potato | cytosol | 98.18 | 76.78 |
| PGSC0003DMT400032908 | Potato | cytosol | 84.24 | 65.88 |
| GSMUA_Achr4P01720_001 | Banana | endoplasmic reticulum, extracellular | 95.15 | 62.8 |
| TraesCS5B01G255300.1 | Wheat | cytosol | 60.0 | 52.94 |
| Os10t0208200-00 | Rice | cytosol | 65.45 | 50.94 |
| TraesCS5A01G256000.1 | Wheat | cytosol | 61.21 | 49.27 |
| TraesCS5D01G264100.1 | Wheat | cytosol | 60.61 | 47.17 |
| HORVU5Hr1G071600.3 | Barley | cytosol | 59.39 | 45.58 |
| TraesCS2B01G542700.1 | Wheat | cytosol | 49.09 | 36.82 |
| PGSC0003DMT400041326 | Potato | cytosol | 44.24 | 35.96 |
| PGSC0003DMT400067463 | Potato | cytosol | 43.64 | 35.47 |
| PGSC0003DMT400034028 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 42.42 | 34.48 |
| PGSC0003DMT400064019 | Potato | cytosol, extracellular | 40.61 | 33.17 |
| PGSC0003DMT400040138 | Potato | cytosol | 40.0 | 30.56 |
| PGSC0003DMT400071317 | Potato | cytosol | 39.39 | 30.09 |
| PGSC0003DMT400049296 | Potato | cytosol | 39.39 | 30.09 |
| PGSC0003DMT400022823 | Potato | cytosol | 39.39 | 30.09 |
| PGSC0003DMT400008917 | Potato | cytosol | 39.39 | 30.09 |
Protein Annotations
| EntrezGene:102600740 | MapMan:22.8.1.2 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | UniProt:M1BWS2 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | EnsemblPlantsGene:PGSC0003DMG400021244 | PGSC:PGSC0003DMG400021244 | EnsemblPlants:PGSC0003DMT400054721 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF597 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0002953C36 | RefSeq:XP_006360009.1 | SEG:seg |
Description
Small GTPase Rab2 [Source:PGSC_GENE;Acc:PGSC0003DMG400021244]
Coordinates
chr10:-:2674206..2676570
Molecular Weight (calculated)
17961.2 Da
IEP (calculated)
6.776
GRAVY (calculated)
-0.360
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MITIDNKPIK LQIWDTAGQE SFRSITRSYY RGAAGALLVY DITRRETFNH LASWLEDARQ HANANMTIML IGNKCDLAHR RAVSTEEGEQ FAKENGLIFM
101: EASAKTAQNV EEAFIKTAST IYKKIQDGVF DVSNESYGIK VGYGGIPGPS GGRDGAASQG GGCCT
101: EASAKTAQNV EEAFIKTAST IYKKIQDGVF DVSNESYGIK VGYGGIPGPS GGRDGAASQG GGCCT
001: MSYAYLFKYI IIGDTGVGKS CLLLQFTDKR FQPVHDLTIG VEFGARMITI DNKPIKLQIW DTAGQESFRS ITRSYYRGAA GALLVYDITR RETFNHLASW
101: LEDARQHANA NMTIMLIGNK CDLAHRRAVS TEEGEQFAKE HGLIFMEASA KTAQNVEEAF IKTAATIYKK IQDGVFDVSN ESYGIKVGYG GIPGPSGGRD
201: GSTSQGGGCC G
101: LEDARQHANA NMTIMLIGNK CDLAHRRAVS TEEGEQFAKE HGLIFMEASA KTAQNVEEAF IKTAATIYKK IQDGVFDVSN ESYGIKVGYG GIPGPSGGRD
201: GSTSQGGGCC G
Arabidopsis Description
RABB1CRABB1C [Source:UniProtKB/TrEMBL;Acc:A0A178V4V1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.