Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21632 | Soybean | nucleus | 83.11 | 72.54 |
| CDY20997 | Canola | nucleus | 33.77 | 32.38 |
| VIT_00s2705g00010.t01 | Wine grape | nucleus | 36.09 | 32.06 |
| CDX97961 | Canola | cytosol | 34.44 | 31.71 |
| Bra016834.1-P | Field mustard | nucleus | 32.78 | 31.53 |
| CDY49782 | Canola | nucleus | 35.1 | 29.94 |
| CDY57038 | Canola | cytosol | 31.46 | 29.69 |
| Bra019852.1-P | Field mustard | nucleus | 34.77 | 28.53 |
| Solyc02g079780.1.1 | Tomato | nucleus | 30.46 | 28.31 |
| PGSC0003DMT400055884 | Potato | nucleus | 29.47 | 27.47 |
| AT1G11440.1 | Thale cress | nucleus | 32.12 | 26.72 |
Protein Annotations
| EMBL:ACUP02009152 | EnsemblPlants:KRH10699 | EnsemblPlantsGene:GLYMA_15G064200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008289 |
| GO:GO:0070300 | InterPro:PLDrp1-like | PANTHER:PTHR33971 | PANTHER:PTHR33971:SF3 | ProteinID:KRH10699 | ProteinID:KRH10699.1 |
| SEG:seg | UniParc:UPI00023D26C8 | UniProt:K7M9Y1 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr15:-:4881333..4882827
Molecular Weight (calculated)
34123.9 Da
IEP (calculated)
4.065
GRAVY (calculated)
-0.867
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYTGYDYNQ PYYGYDSSLY YASNYPAENC QTISYSATMY SDPKSVLYDP NYGMSQLVIS YSKVKFNVPE FDDYDPTPYG GGYDIDQTYG KALPPSDKIC
101: YPRSESSPIT EPPFSESIVP LPTIEEGIEE KAITPQNGAI VQTKTEEKPQ SQDSGKDQPK EVEDNNFNTE SEGSHQEDDN YSESGIVSGF IEGYKEHEKQ
201: VVPVVPQYPS GYGLEAMDIC ESLFGYWPCL ERMKKRECCC EEVSYRGNNC QENMWQGTAG YLFGSPNPYG GSGYGGDVVY GYQRHYPMQV QHRQIDYTDG
301: SW
101: YPRSESSPIT EPPFSESIVP LPTIEEGIEE KAITPQNGAI VQTKTEEKPQ SQDSGKDQPK EVEDNNFNTE SEGSHQEDDN YSESGIVSGF IEGYKEHEKQ
201: VVPVVPQYPS GYGLEAMDIC ESLFGYWPCL ERMKKRECCC EEVSYRGNNC QENMWQGTAG YLFGSPNPYG GSGYGGDVVY GYQRHYPMQV QHRQIDYTDG
301: SW
001: MANFYENYQS PYDYNQVNNL YDQNHYHYNQ QQQQLGFEPM SYNYYNWNES ESESEYVAYS GYDDPMSYNC YNWNGSESET TSAYVAYSVS TMSEPKHLFY
101: DPNLYTTYES PPQFSIYCSV ASALDFNEPE FDEYDPTPYG GGYDVVATYG KPLPPSVETC YPCSTAPHAK APSPPEIIAP VPLGIYDGGQ KNVVKKRVSF
201: AEPVEEVKPI ETIKEQEQEQ DEDYDEESED EDDGDDDDEE EEEGDEEAKE EEKDHSSSYG NEEYEVVDKG EVKALYVPSG YGLEATDLCE VIFGGYFPCV
301: LRNKRRQEDE QDRGAAVSCW ESNDSDPWKT TSDHLFGDSY PYGYENRSER NQFEVSSYGY RMY
101: DPNLYTTYES PPQFSIYCSV ASALDFNEPE FDEYDPTPYG GGYDVVATYG KPLPPSVETC YPCSTAPHAK APSPPEIIAP VPLGIYDGGQ KNVVKKRVSF
201: AEPVEEVKPI ETIKEQEQEQ DEDYDEESED EDDGDDDDEE EEEGDEEAKE EEKDHSSSYG NEEYEVVDKG EVKALYVPSG YGLEATDLCE VIFGGYFPCV
301: LRNKRRQEDE QDRGAAVSCW ESNDSDPWKT TSDHLFGDSY PYGYENRSER NQFEVSSYGY RMY
Arabidopsis Description
At1g11440 [Source:UniProtKB/TrEMBL;Acc:Q9LPZ0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.