Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10699 | Soybean | nucleus | 72.54 | 83.11 |
| VIT_00s2705g00010.t01 | Wine grape | nucleus | 33.81 | 34.41 |
| CDY49782 | Canola | nucleus | 32.95 | 32.2 |
| CDY20997 | Canola | nucleus | 29.19 | 32.06 |
| CDX97961 | Canola | cytosol | 30.35 | 32.01 |
| Bra016834.1-P | Field mustard | nucleus | 28.32 | 31.21 |
| CDY57038 | Canola | cytosol | 28.61 | 30.94 |
| Solyc02g079780.1.1 | Tomato | nucleus | 28.9 | 30.77 |
| PGSC0003DMT400055884 | Potato | nucleus | 28.03 | 29.94 |
| Bra019852.1-P | Field mustard | nucleus | 31.21 | 29.35 |
| AT1G11440.1 | Thale cress | nucleus | 30.06 | 28.65 |
Protein Annotations
| EMBL:ACUP02008360 | EnsemblPlants:KRH21632 | EnsemblPlantsGene:GLYMA_13G250000 | EntrezGene:102661545 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008289 | GO:GO:0070300 | InterPro:PLDrp1-like | PANTHER:PTHR33971 | PANTHER:PTHR33971:SF3 | ProteinID:KRH21632 |
| ProteinID:KRH21632.1 | SEG:seg | UniParc:UPI00023CE9A1 | UniProt:K7M1S7 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr13:+:35763055..35765380
Molecular Weight (calculated)
39047.9 Da
IEP (calculated)
3.933
GRAVY (calculated)
-0.977
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYYSSAYSG SENYGEYNFN SYALNYDYAQ IPSYMAYTSY EYNQNQPYYG YDSSLYYAPN YPAETYQTQT TSYSATTYSD PKSVVYVPNN GMSQLVISYS
101: KAEFNVPEFD DYDPTPYGGG YDIDQTYGKA LPPSDKICYP RSGSSPITEP QPLFSGPIVP LPTIEEGIEE KPITPQNGAI IQTKTEEKPQ SQDSGKDHPK
201: EVEDNNFDTE SEGSDDHEDD NYSESGIDEG YNGGQGYDEH EKQVVPVVPQ YPSGYGLEAM DICESLFGYW PCLDRMKKKR ECCCEEVSYR GNNCQENMWQ
301: GTADYLFGSP NPYGGSGYGG DVVYGYQRHH PMQAQYKQID YTDGSW
101: KAEFNVPEFD DYDPTPYGGG YDIDQTYGKA LPPSDKICYP RSGSSPITEP QPLFSGPIVP LPTIEEGIEE KPITPQNGAI IQTKTEEKPQ SQDSGKDHPK
201: EVEDNNFDTE SEGSDDHEDD NYSESGIDEG YNGGQGYDEH EKQVVPVVPQ YPSGYGLEAM DICESLFGYW PCLDRMKKKR ECCCEEVSYR GNNCQENMWQ
301: GTADYLFGSP NPYGGSGYGG DVVYGYQRHH PMQAQYKQID YTDGSW
001: MANFYENYQS PYDYNQVNNL YDQNHYHYNQ QQQQLGFEPM SYNYYNWNES ESESEYVAYS GYDDPMSYNC YNWNGSESET TSAYVAYSVS TMSEPKHLFY
101: DPNLYTTYES PPQFSIYCSV ASALDFNEPE FDEYDPTPYG GGYDVVATYG KPLPPSVETC YPCSTAPHAK APSPPEIIAP VPLGIYDGGQ KNVVKKRVSF
201: AEPVEEVKPI ETIKEQEQEQ DEDYDEESED EDDGDDDDEE EEEGDEEAKE EEKDHSSSYG NEEYEVVDKG EVKALYVPSG YGLEATDLCE VIFGGYFPCV
301: LRNKRRQEDE QDRGAAVSCW ESNDSDPWKT TSDHLFGDSY PYGYENRSER NQFEVSSYGY RMY
101: DPNLYTTYES PPQFSIYCSV ASALDFNEPE FDEYDPTPYG GGYDVVATYG KPLPPSVETC YPCSTAPHAK APSPPEIIAP VPLGIYDGGQ KNVVKKRVSF
201: AEPVEEVKPI ETIKEQEQEQ DEDYDEESED EDDGDDDDEE EEEGDEEAKE EEKDHSSSYG NEEYEVVDKG EVKALYVPSG YGLEATDLCE VIFGGYFPCV
301: LRNKRRQEDE QDRGAAVSCW ESNDSDPWKT TSDHLFGDSY PYGYENRSER NQFEVSSYGY RMY
Arabidopsis Description
At1g11440 [Source:UniProtKB/TrEMBL;Acc:Q9LPZ0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.