CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94092	Soybean	nucleus	41.27	58.43
KRH49797	Soybean	nucleus	58.73	51.03
KRH55348	Soybean	nucleus	46.03	46.77
KRH11843	Soybean	nucleus	45.24	45.97
KRH62917	Soybean	nucleus	36.51	44.23
KRH31759	Soybean	nucleus	81.75	43.64
KRH33348	Soybean	nucleus	34.13	42.16
KRH75688	Soybean	nucleus	35.71	41.67
KRG94086	Soybean	nucleus	51.59	31.55
KRH07188	Soybean	nucleus	51.59	31.25
KRG93265	Soybean	nucleus	50.0	30.73
KRG96563	Soybean	nucleus	57.94	30.67
KRH56587	Soybean	nucleus	50.0	30.58
KRH68299	Soybean	nucleus	54.76	29.11
KRH68301	Soybean	nucleus	59.52	28.2
KRG96561	Soybean	nucleus	54.76	26.54
KRH69178	Soybean	nucleus	51.59	25.0
VIT_07s0005g01950.t01	Wine grape	nucleus	53.17	24.63
KRH31760	Soybean	nucleus	53.17	23.76
KRG90311	Soybean	nucleus	46.83	22.69
KRG92245	Soybean	nucleus	45.24	22.44
KRH04452	Soybean	nucleus	46.03	21.89
KRH34553	Soybean	nucleus	46.03	21.8
KRH02414	Soybean	nucleus	54.76	21.43
KRH50671	Soybean	nucleus	53.97	20.92
KRH19953	Soybean	nucleus	37.3	20.52
KRH36928	Soybean	nucleus	54.76	20.29
KRG97314	Soybean	nucleus	54.76	20.23
KRH01379	Soybean	nucleus	41.27	20.16
KRH32555	Soybean	nucleus	36.51	19.83
KRG90844	Soybean	nucleus	47.62	19.54
KRH35934	Soybean	nucleus	47.62	19.48
KRH48497	Soybean	nucleus	46.83	18.97
KRH45095	Soybean	nucleus	40.48	18.55
KRH33568	Soybean	nucleus	46.83	18.44
KRH10298	Soybean	nucleus	37.3	18.43
KRH39173	Soybean	nucleus	45.24	18.39
KRH01378	Soybean	nucleus	40.48	18.28
KRH41648	Soybean	nucleus	45.24	18.27
KRH24842	Soybean	nucleus	38.1	18.05
KRH60346	Soybean	nucleus	45.24	17.98
KRH23019	Soybean	nucleus	37.3	17.8
KRH29850	Soybean	nucleus	37.3	17.67
HORVU5Hr1G022710.1	Barley	cytosol, nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EMBL:ACUP02008030	EnsemblPlantsGene:GLYMA_13G038100	GO:GO:0000981	GO:GO:0001135
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7LY08	EnsemblPlants:KRH18107	ProteinID:KRH18107	ProteinID:KRH18107.1
InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF743	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000294A82A	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:11786608..11792614

Molecular Weight (calculated)

14660.8 Da

IEP (calculated)

10.410

GRAVY (calculated)

-0.688

Length

126 amino acids

Sequence
(BLAST)

001: MDVKKGGSLV QMQVKLQKHN EKEMGMRKGP WAVGEDTILF NYIATHGGGH WNSVARCAGL RRSGKSYRLR WLNYLRPDVW HGNVTLQEQI LILDFHCRRG
101: NMYGGQTCQQ LLGRTDNKIK NYWRIE

Best Arabidopsis Sequence Match ( AT3G01530.1 )
(BLAST)

001: METTMKKKGR VKATITSQKE EEGTVRKGPW TMEEDFILFN YILNHGEGLW NSVAKASGLK RTGKSCRLRW LNYLRPDVRR GNITEEEQLL IIQLHAKLGN
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI

Arabidopsis Description

MYB57Transcription factor MYB57 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.