Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH39173 | Soybean | nucleus | 84.89 | 85.16 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 30.23 | 75.81 |
| KRG94092 | Soybean | nucleus | 18.65 | 65.17 |
| GSMUA_Achr10P... | Banana | nucleus | 31.51 | 56.0 |
| KRH55348 | Soybean | nucleus | 21.54 | 54.03 |
| KRH62917 | Soybean | nucleus | 18.01 | 53.85 |
| KRH11843 | Soybean | nucleus | 21.22 | 53.23 |
| KRH33348 | Soybean | nucleus | 17.36 | 52.94 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 32.8 | 52.31 |
| KRH75688 | Soybean | nucleus | 16.72 | 48.15 |
| KRH18107 | Soybean | nucleus | 18.97 | 46.83 |
| KRH41648 | Soybean | nucleus | 45.98 | 45.83 |
| KRH60346 | Soybean | nucleus | 45.98 | 45.11 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 35.05 | 43.78 |
| KRG93265 | Soybean | nucleus | 28.62 | 43.41 |
| KRH56587 | Soybean | nucleus | 28.62 | 43.2 |
| KRH07188 | Soybean | nucleus | 28.62 | 42.79 |
| KRG94086 | Soybean | nucleus | 28.3 | 42.72 |
| KRH31759 | Soybean | nucleus | 30.23 | 39.83 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 37.3 | 39.73 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 38.91 | 39.29 |
| VIT_17s0000g03560.t01 | Wine grape | nucleus | 40.84 | 38.72 |
| KRH68299 | Soybean | nucleus | 29.26 | 38.4 |
| KRH35934 | Soybean | nucleus | 36.98 | 37.34 |
| KRG90844 | Soybean | nucleus | 36.66 | 37.13 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 36.01 | 36.96 |
| KRG96563 | Soybean | nucleus | 27.97 | 36.55 |
| KRG96561 | Soybean | nucleus | 30.55 | 36.54 |
| GSMUA_Achr11P... | Banana | nucleus | 36.98 | 36.51 |
| KRH02414 | Soybean | nucleus | 35.37 | 34.16 |
| KRH69178 | Soybean | nucleus | 28.3 | 33.85 |
| KRH68301 | Soybean | nucleus | 28.62 | 33.46 |
| KRH10298 | Soybean | nucleus | 27.01 | 32.94 |
| KRH50671 | Soybean | nucleus | 34.41 | 32.92 |
| Zm00001d040019_P001 | Maize | nucleus | 38.26 | 32.87 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 36.33 | 32.85 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 36.33 | 32.66 |
| Os01t0128000-01 | Rice | nucleus | 36.66 | 32.57 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 36.33 | 32.19 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 36.33 | 32.19 |
| KRH36928 | Soybean | nucleus | 35.05 | 32.06 |
| Zm00001d008528_P001 | Maize | nucleus | 37.3 | 32.04 |
| KRG97314 | Soybean | nucleus | 35.05 | 31.96 |
| KRH19953 | Soybean | nucleus | 23.15 | 31.44 |
| KRH29850 | Soybean | nucleus | 26.69 | 31.2 |
| KRH24842 | Soybean | nucleus | 26.69 | 31.2 |
| KRH23019 | Soybean | nucleus | 26.37 | 31.06 |
| EES00381 | Sorghum | nucleus | 38.59 | 30.85 |
| KRH32555 | Soybean | nucleus | 22.83 | 30.6 |
| KRH31760 | Soybean | nucleus | 27.65 | 30.5 |
| KRH49797 | Soybean | nucleus | 14.15 | 30.34 |
| KRG92245 | Soybean | nucleus | 24.76 | 30.32 |
| KRG90311 | Soybean | nucleus | 25.08 | 30.0 |
| KRH34553 | Soybean | nucleus | 25.4 | 29.7 |
| KRH04452 | Soybean | nucleus | 25.08 | 29.43 |
| KRH01379 | Soybean | nucleus | 22.83 | 27.52 |
| KRH01378 | Soybean | nucleus | 23.47 | 26.16 |
| KRH45095 | Soybean | nucleus | 22.51 | 25.45 |
| KRH33568 | Soybean | nucleus | 25.72 | 25.0 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100804227 | MapMan:15.5.2.1 | UniProt:A0A0R0J177 | EMBL:ACUP02004242 | EnsemblPlantsGene:GLYMA_07G092800 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KRH48497 | ProteinID:KRH48497 |
| ProteinID:KRH48497.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF510 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0003DECCF1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr7:+:8673359..8674772
Molecular Weight (calculated)
35563.6 Da
IEP (calculated)
6.578
GRAVY (calculated)
-0.640
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLAMSTPSK SIICSSEDDY ELRRGPWSVE EDYLLTHYIA NHGEGRWNLL AIRSGLRRTG KSCRLRWLNY LKPNVKRGNL TSEEQLLIFE LHSKWGNRWS
101: KIAQQLPGRT DNEIKNYWRT RIQKQAIYAK FEDHRRAGFV EFVKGLQMTR CLHKSQESSP SAMSIQDQAI PLPFDGVTVP HYSSFGIGTT PTIQITCHGD
201: LNHLNQHEQN SDSEHHNSSC ISSSESANIP NMSQPFGYTT SQFQALDNCD FGMCLYDGYS IDNNSYDRDA LNLTTTMVAG NLELPVFDCQ TLETNRLNKE
301: FASSTWSMDE L
101: KIAQQLPGRT DNEIKNYWRT RIQKQAIYAK FEDHRRAGFV EFVKGLQMTR CLHKSQESSP SAMSIQDQAI PLPFDGVTVP HYSSFGIGTT PTIQITCHGD
201: LNHLNQHEQN SDSEHHNSSC ISSSESANIP NMSQPFGYTT SQFQALDNCD FGMCLYDGYS IDNNSYDRDA LNLTTTMVAG NLELPVFDCQ TLETNRLNKE
301: FASSTWSMDE L
001: MSNITKKKCN GNEEGAEQRK GPWTLEEDTL LTNYISHNGE GRWNLLAKSS GLKRAGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKISK
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
Arabidopsis Description
MYB116myb domain protein 116 [Source:TAIR;Acc:AT1G25340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.