Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRG90844 | Soybean | nucleus | 96.1 | 96.42 |
KRG94092 | Soybean | nucleus | 19.81 | 68.54 |
CDY58599 | Canola | nucleus | 22.73 | 66.04 |
KRH62917 | Soybean | nucleus | 21.1 | 62.5 |
KRH55348 | Soybean | nucleus | 25.0 | 62.1 |
KRH33348 | Soybean | nucleus | 20.45 | 61.76 |
KRH11843 | Soybean | nucleus | 24.68 | 61.29 |
KRH75688 | Soybean | nucleus | 19.81 | 56.48 |
VIT_01s0011g03730.t01 | Wine grape | nucleus | 47.4 | 50.69 |
KRH07188 | Soybean | nucleus | 32.79 | 48.56 |
KRG94086 | Soybean | nucleus | 32.47 | 48.54 |
Solyc05g009230.1.1 | Tomato | nucleus | 43.18 | 48.54 |
PGSC0003DMT400037716 | Potato | nucleus | 42.86 | 48.35 |
KRH18107 | Soybean | nucleus | 19.48 | 47.62 |
KRH56587 | Soybean | nucleus | 31.82 | 47.57 |
KRG96563 | Soybean | nucleus | 36.69 | 47.48 |
KRG93265 | Soybean | nucleus | 31.49 | 47.32 |
CDY69488 | Canola | nucleus | 42.21 | 46.93 |
CDY01906 | Canola | nucleus | 43.18 | 46.67 |
CDY69953 | Canola | nucleus | 42.53 | 46.45 |
CDX96033 | Canola | nucleus | 42.53 | 46.13 |
Bra004297.1-P | Field mustard | nucleus | 42.53 | 46.13 |
Bra004041.1-P | Field mustard | nucleus | 42.21 | 46.1 |
AT1G68320.1 | Thale cress | nucleus | 42.53 | 45.8 |
CDY12705 | Canola | nucleus | 41.88 | 45.26 |
Bra033948.1-P | Field mustard | nucleus | 41.56 | 44.91 |
CDY54094 | Canola | nucleus | 41.23 | 44.56 |
Bra012482.1-P | Field mustard | nucleus | 40.58 | 44.01 |
KRH68299 | Soybean | nucleus | 33.77 | 43.88 |
KRH31759 | Soybean | nucleus | 33.44 | 43.64 |
CDY42115 | Canola | nucleus | 38.96 | 43.32 |
KRH41648 | Soybean | nucleus | 43.83 | 43.27 |
KRH68301 | Soybean | nucleus | 37.34 | 43.23 |
CDY03859 | Canola | nucleus | 39.94 | 42.86 |
CDX84981 | Canola | nucleus | 39.61 | 42.36 |
KRH60346 | Soybean | nucleus | 43.18 | 41.96 |
Bra024760.1-P | Field mustard | nucleus | 35.71 | 41.35 |
KRG96561 | Soybean | nucleus | 34.74 | 41.15 |
KRH69178 | Soybean | nucleus | 33.77 | 40.0 |
KRH31760 | Soybean | nucleus | 35.06 | 38.3 |
AT1G25340.3 | Thale cress | nucleus | 37.66 | 37.66 |
KRH49797 | Soybean | nucleus | 17.53 | 37.24 |
KRH48497 | Soybean | nucleus | 37.34 | 36.98 |
KRH39173 | Soybean | nucleus | 36.69 | 36.45 |
KRH02414 | Soybean | nucleus | 37.34 | 35.71 |
KRH50671 | Soybean | nucleus | 37.01 | 35.08 |
KRG92245 | Soybean | nucleus | 28.57 | 34.65 |
KRH10298 | Soybean | nucleus | 28.57 | 34.51 |
KRH24842 | Soybean | nucleus | 29.55 | 34.21 |
KRH36928 | Soybean | nucleus | 37.34 | 33.82 |
KRH29850 | Soybean | nucleus | 28.9 | 33.46 |
KRG97314 | Soybean | nucleus | 37.01 | 33.43 |
KRH23019 | Soybean | nucleus | 28.57 | 33.33 |
KRH34553 | Soybean | nucleus | 28.57 | 33.08 |
KRH04452 | Soybean | nucleus | 28.25 | 32.83 |
KRG90311 | Soybean | nucleus | 27.27 | 32.31 |
KRH19953 | Soybean | nucleus | 23.7 | 31.88 |
KRH01379 | Soybean | nucleus | 25.32 | 30.23 |
KRH32555 | Soybean | nucleus | 22.73 | 30.17 |
KRH33568 | Soybean | nucleus | 28.57 | 27.5 |
KRH01378 | Soybean | nucleus | 24.68 | 27.24 |
KRH45095 | Soybean | nucleus | 24.03 | 26.91 |
Protein Annotations
Gene3D:1.10.10.60 | EntrezGene:100780759 | MapMan:15.5.2.1 | EMBL:ACUP02006711 | EnsemblPlantsGene:GLYMA_10G273000 | GO:GO:0000981 |
GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0003824 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 |
GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1LEV6 | InterPro:IPR017930 | EnsemblPlants:KRH35934 |
ProteinID:KRH35934 | ProteinID:KRH35934.1 | InterPro:Myb_dom | PFAM:PF00249 | InterPro:PG/BPGM_mutase_AS | ScanProsite:PS00175 |
PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF510 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
UniParc:UPI0001D83AE7 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:49546837..49548462
Molecular Weight (calculated)
35324.6 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.757
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTIAKRDLS SNEEESELRR GPWTLEEDSL LIHYIARHGE GRWNMLAKSA GLKRTGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKIAQ
101: HLPGRTDNEI KNYWRTRIQK QARQLNIESG SKRFIDAVKC FWMPRLLQKM EQSNSPSPHH SSMTNMMNLG NSGEASMSSM SSSFNINPSM SSSSSPPQRE
201: FIMDDANHFN TMSNPINPSP DSFQFSQLLE ISEHPKSPSN VFENNVCSYP IQDNCYVDTN NYGMEGINMD PLSAMDTYDF PQFDFQTAGN GWMLDSMGDS
301: TLWNMEAM
101: HLPGRTDNEI KNYWRTRIQK QARQLNIESG SKRFIDAVKC FWMPRLLQKM EQSNSPSPHH SSMTNMMNLG NSGEASMSSM SSSFNINPSM SSSSSPPQRE
201: FIMDDANHFN TMSNPINPSP DSFQFSQLLE ISEHPKSPSN VFENNVCSYP IQDNCYVDTN NYGMEGINMD PLSAMDTYDF PQFDFQTAGN GWMLDSMGDS
301: TLWNMEAM
001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
Arabidopsis Description
MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.