Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033948.1-P | Field mustard | nucleus | 98.95 | 98.95 |
| CDY54094 | Canola | nucleus | 96.14 | 96.14 |
| CDY69488 | Canola | nucleus | 84.21 | 86.64 |
| CDY69953 | Canola | nucleus | 85.61 | 86.52 |
| CDY01906 | Canola | nucleus | 83.86 | 83.86 |
| CDX96033 | Canola | nucleus | 83.16 | 83.45 |
| AT1G68320.1 | Thale cress | nucleus | 82.11 | 81.82 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 31.93 | 73.39 |
| CDY58599 | Canola | nucleus | 24.56 | 66.04 |
| CDY42115 | Canola | nucleus | 57.54 | 59.21 |
| CDY03859 | Canola | nucleus | 58.25 | 57.84 |
| CDX84981 | Canola | nucleus | 58.25 | 57.64 |
| GSMUA_Achr10P... | Banana | nucleus | 34.39 | 56.0 |
| CDX85422 | Canola | nucleus | 35.44 | 55.19 |
| CDX86220 | Canola | nucleus | 35.44 | 52.33 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 34.39 | 50.26 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 40.7 | 46.59 |
| VIT_01s0011g03730.t01 | Wine grape | nucleus | 45.26 | 44.79 |
| CDY37512 | Canola | nucleus | 30.88 | 43.78 |
| Solyc03g119370.1.1 | Tomato | nucleus | 42.81 | 43.57 |
| KRG90844 | Soybean | nucleus | 46.32 | 43.0 |
| PGSC0003DMT400014383 | Potato | nucleus | 41.75 | 42.81 |
| CDY49063 | Canola | nucleus | 30.88 | 42.51 |
| CDY00146 | Canola | nucleus | 24.56 | 42.17 |
| KRH35934 | Soybean | nucleus | 45.26 | 41.88 |
| CDX91944 | Canola | nucleus | 29.47 | 40.58 |
| CDX74303 | Canola | nucleus | 29.47 | 40.38 |
| CDX95420 | Canola | nucleus | 32.63 | 40.09 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 42.46 | 39.93 |
| CDY20036 | Canola | nucleus | 31.93 | 39.22 |
| CDY44433 | Canola | nucleus | 31.93 | 39.22 |
| CDX86471 | Canola | nucleus | 31.93 | 39.22 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 40.0 | 39.04 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 40.0 | 37.01 |
| GSMUA_Achr11P... | Banana | nucleus | 40.35 | 36.51 |
| CDY27504 | Canola | nucleus | 34.74 | 36.4 |
| Os01t0128000-01 | Rice | nucleus | 43.51 | 35.43 |
| Zm00001d040019_P001 | Maize | nucleus | 44.21 | 34.81 |
| CDY58600 | Canola | nucleus | 38.95 | 34.37 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 41.4 | 34.3 |
| CDX80085 | Canola | nucleus | 23.86 | 34.17 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 41.4 | 34.1 |
| Zm00001d008528_P001 | Maize | nucleus | 43.16 | 33.98 |
| CDY33891 | Canola | nucleus | 37.54 | 33.65 |
| CDY05611 | Canola | nucleus | 37.54 | 33.65 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 41.4 | 33.62 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 41.4 | 33.62 |
| CDY70097 | Canola | nucleus | 27.72 | 33.47 |
| CDY49581 | Canola | nucleus | 27.72 | 33.33 |
| CDY24688 | Canola | nucleus | 36.84 | 32.92 |
| CDX80230 | Canola | nucleus | 27.37 | 32.91 |
| CDY05270 | Canola | nucleus | 36.84 | 32.61 |
| CDX99864 | Canola | nucleus | 36.49 | 32.5 |
| CDY34949 | Canola | nucleus | 36.49 | 32.5 |
| CDX71075 | Canola | nucleus | 27.37 | 32.37 |
| CDX77436 | Canola | nucleus | 29.47 | 32.31 |
| CDX88722 | Canola | nucleus | 27.37 | 32.23 |
| EES00381 | Sorghum | nucleus | 43.16 | 31.62 |
| CDY61190 | Canola | nucleus | 28.77 | 31.42 |
| CDY49231 | Canola | nucleus | 29.47 | 31.34 |
| CDX94829 | Canola | nucleus | 29.82 | 31.14 |
| CDX93006 | Canola | nucleus | 29.82 | 31.02 |
| CDY64694 | Canola | nucleus | 29.12 | 30.29 |
| CDY70282 | Canola | nucleus | 30.18 | 29.25 |
| CDY45895 | Canola | nucleus | 26.32 | 29.18 |
| CDX86041 | Canola | nucleus | 28.42 | 29.14 |
| CDX99125 | Canola | nucleus | 28.42 | 29.14 |
| CDX86040 | Canola | nucleus | 28.07 | 28.78 |
| CDX86354 | Canola | nucleus | 26.67 | 28.36 |
| CDX85285 | Canola | nucleus | 26.67 | 28.15 |
| CDY00083 | Canola | nucleus | 25.61 | 27.04 |
| CDY19978 | Canola | nucleus | 25.26 | 26.97 |
| CDX73572 | Canola | nucleus | 23.16 | 26.94 |
| CDY13311 | Canola | nucleus | 22.81 | 26.64 |
| CDX78153 | Canola | nucleus | 22.81 | 26.53 |
| CDX67561 | Canola | nucleus | 22.11 | 26.25 |
| CDX74100 | Canola | nucleus | 29.12 | 24.63 |
| CDY35782 | Canola | nucleus | 15.44 | 21.46 |
| CDX86221 | Canola | nucleus | 2.46 | 10.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078FEA6 | UniProt:A0A078FEA6 | EnsemblPlants:CDY12705 | ProteinID:CDY12705 |
| ProteinID:CDY12705.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00070235001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF510 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE6D5F | SEG:seg |
Description
BnaA02g13730DBnaA02g13730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEA6]
Coordinates
chrLK032025:+:840797..841849
Molecular Weight (calculated)
33211.8 Da
IEP (calculated)
5.433
GRAVY (calculated)
-0.887
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MENSMKKKTF TESEEVELRR GPWTLEEDTL LTNYILQNSE GRWNVVAKCA GLKRNGKSCR LRWLNYLKPD IRRGNLSPQE QLLILDLHSK WGNRWSKIAQ
101: YLPGRTDNEI KNYWRTRVQK QARQLNIESN SDRFFDAVRS FWVPRLIEKM EQNPSNTYCC PQNNNNNNNS LLPPSQSYDS MSKQTYTDIS GKNPGISNTD
201: VSASSSTFMP DLMTVPHFMD HNTIIDSSMC YHEGNDQELG GYIPGMEEYY MRNSDISTDC HVAEAYEDVT QDPMWNVDDI WQFRG
101: YLPGRTDNEI KNYWRTRVQK QARQLNIESN SDRFFDAVRS FWVPRLIEKM EQNPSNTYCC PQNNNNNNNS LLPPSQSYDS MSKQTYTDIS GKNPGISNTD
201: VSASSSTFMP DLMTVPHFMD HNTIIDSSMC YHEGNDQELG GYIPGMEEYY MRNSDISTDC HVAEAYEDVT QDPMWNVDDI WQFRG
001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
Arabidopsis Description
MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.