Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006977.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX73572 | Canola | nucleus | 91.43 | 91.43 |
| CDX67561 | Canola | nucleus | 79.59 | 81.25 |
| AT3G53200.1 | Thale cress | nucleus | 78.37 | 80.67 |
| CDY13311 | Canola | nucleus | 78.37 | 78.69 |
| VIT_08s0007g04830.t01 | Wine grape | nucleus | 35.51 | 70.73 |
| Solyc09g008390.1.1 | Tomato | nucleus | 29.8 | 55.73 |
| PGSC0003DMT400072687 | Potato | nucleus | 30.61 | 55.15 |
| KRH19953 | Soybean | nucleus | 40.41 | 43.23 |
| KRH32555 | Soybean | nucleus | 40.41 | 42.67 |
| Solyc10g083900.1.1 | Tomato | nucleus | 34.69 | 42.5 |
| CDY58599 | Canola | nucleus | 18.37 | 42.45 |
| CDX85422 | Canola | nucleus | 27.76 | 37.16 |
| CDX71075 | Canola | nucleus | 36.33 | 36.93 |
| CDY49581 | Canola | nucleus | 35.51 | 36.71 |
| CDX80230 | Canola | nucleus | 35.51 | 36.71 |
| CDY70097 | Canola | nucleus | 35.1 | 36.44 |
| CDX88722 | Canola | nucleus | 35.51 | 35.95 |
| CDX86220 | Canola | nucleus | 27.76 | 35.23 |
| CDX86040 | Canola | nucleus | 37.96 | 33.45 |
| CDX86041 | Canola | nucleus | 37.55 | 33.09 |
| CDX99125 | Canola | nucleus | 37.55 | 33.09 |
| CDY37512 | Canola | nucleus | 26.53 | 32.34 |
| CDY00146 | Canola | nucleus | 21.63 | 31.93 |
| CDX91944 | Canola | nucleus | 26.53 | 31.4 |
| CDY49063 | Canola | nucleus | 26.53 | 31.4 |
| CDX74303 | Canola | nucleus | 26.53 | 31.25 |
| CDY61190 | Canola | nucleus | 32.65 | 30.65 |
| CDX95420 | Canola | nucleus | 28.98 | 30.6 |
| CDX77436 | Canola | nucleus | 32.24 | 30.38 |
| CDY45895 | Canola | nucleus | 31.02 | 29.57 |
| CDY49231 | Canola | nucleus | 32.24 | 29.48 |
| CDX85285 | Canola | nucleus | 32.24 | 29.26 |
| CDY64694 | Canola | nucleus | 32.65 | 29.2 |
| CDX86354 | Canola | nucleus | 31.84 | 29.1 |
| CDX94829 | Canola | nucleus | 32.24 | 28.94 |
| CDX93006 | Canola | nucleus | 32.24 | 28.83 |
| CDY00083 | Canola | nucleus | 31.02 | 28.15 |
| CDY19978 | Canola | nucleus | 30.61 | 28.09 |
| CDY27504 | Canola | nucleus | 31.02 | 27.94 |
| CDX86471 | Canola | nucleus | 26.12 | 27.59 |
| CDY20036 | Canola | nucleus | 26.12 | 27.59 |
| CDY44433 | Canola | nucleus | 26.12 | 27.59 |
| CDX80085 | Canola | nucleus | 21.22 | 26.13 |
| CDY42115 | Canola | nucleus | 28.16 | 24.91 |
| CDY03859 | Canola | nucleus | 28.98 | 24.74 |
| CDX84981 | Canola | nucleus | 28.98 | 24.65 |
| CDY69488 | Canola | nucleus | 26.94 | 23.83 |
| CDY33891 | Canola | nucleus | 30.61 | 23.58 |
| CDY05611 | Canola | nucleus | 30.61 | 23.58 |
| CDY69953 | Canola | nucleus | 26.94 | 23.4 |
| CDY35782 | Canola | nucleus | 19.18 | 22.93 |
| CDX96033 | Canola | nucleus | 26.53 | 22.89 |
| CDY24688 | Canola | nucleus | 29.8 | 22.88 |
| CDX99864 | Canola | nucleus | 29.8 | 22.81 |
| CDY34949 | Canola | nucleus | 29.8 | 22.81 |
| CDY54094 | Canola | nucleus | 26.53 | 22.81 |
| CDY12705 | Canola | nucleus | 26.53 | 22.81 |
| CDY01906 | Canola | nucleus | 26.53 | 22.81 |
| CDY05270 | Canola | nucleus | 29.8 | 22.67 |
| CDY70282 | Canola | nucleus | 23.67 | 19.73 |
| CDX74100 | Canola | nucleus | 23.27 | 16.91 |
| CDY58600 | Canola | nucleus | 15.1 | 11.46 |
| CDX86221 | Canola | nucleus | 1.22 | 4.29 |
Protein Annotations
| EnsemblPlants:CDX78153 | EnsemblPlantsGene:GSBRNA2T00129456001 | Gene3D:1.10.10.60 | GO:A0A078CSM9 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF636 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX78153 | ProteinID:CDX78153.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002542F14 | MapMan:15.5.2.1 | : |
Description
BnaA09g33480D
Coordinates
chrLK031814:-:1432463..1433437
Molecular Weight (calculated)
29212.1 Da
IEP (calculated)
6.798
GRAVY (calculated)
-1.038
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYKKEENLR RGPWLEEEDE RLVKFVTLLG ERRWDSLARV SGLKRSGKSC RLRWMNYLNP SLKRGPMSLE EETIIFQLHA FWGNKWSKIA RRLPGRTDNE
101: VKNYYRTHFR KKLEGQNYDK IIDWSRNTGE DLLRKYKETE ITWTRTTTQE HGFDKTVKES KQMNMESDKE TCGGIFERES FGVMKSPYEN RISDWISEIS
201: TDQSDANVLE ERTSSSSENN ININVGSWWF QETRDIEEFS CSLWS
101: VKNYYRTHFR KKLEGQNYDK IIDWSRNTGE DLLRKYKETE ITWTRTTTQE HGFDKTVKES KQMNMESDKE TCGGIFERES FGVMKSPYEN RISDWISEIS
201: TDQSDANVLE ERTSSSSENN ININVGSWWF QETRDIEEFS CSLWS
001: MDFKKEETLR RGPWLEEEDE RLVKVISLLG ERRWDSLAIV SGLKRSGKSC RLRWMNYLNP TLKRGPMSQE EERIIFQLHA LWGNKWSKIA RRLPGRTDNE
101: IKNYWRTHYR KKQEAQNYGK LFEWRGNTGE ELLHKYKETE ITRTKTTSQE HGFVEVVSME SGKEANGGVG GRESFGVMKS PYENRISDWI SEISTDQSEA
201: NLSEDHSSNS CSENNINIGT WWFQETRDFE EFSCSLWS
101: IKNYWRTHYR KKQEAQNYGK LFEWRGNTGE ELLHKYKETE ITRTKTTSQE HGFVEVVSME SGKEANGGVG GRESFGVMKS PYENRISDWI SEISTDQSEA
201: NLSEDHSSNS CSENNINIGT WWFQETRDFE EFSCSLWS
Arabidopsis Description
MYB27Transcription factor MYB27 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.