Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37512 | Canola | nucleus | 91.3 | 94.03 |
| CDX91944 | Canola | nucleus | 82.61 | 82.61 |
| CDX74303 | Canola | nucleus | 82.13 | 81.73 |
| AT3G01530.1 | Thale cress | nucleus | 77.78 | 78.16 |
| CDY58599 | Canola | nucleus | 27.54 | 53.77 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 46.86 | 49.49 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 43.96 | 46.67 |
| CDY00146 | Canola | nucleus | 37.2 | 46.39 |
| CDX85422 | Canola | nucleus | 40.58 | 45.9 |
| CDY20036 | Canola | nucleus | 48.79 | 43.53 |
| CDY44433 | Canola | nucleus | 48.31 | 43.1 |
| CDX86471 | Canola | nucleus | 48.31 | 43.1 |
| CDX86220 | Canola | nucleus | 40.1 | 43.01 |
| TraesCS1D01G415000.1 | Wheat | nucleus | 45.89 | 41.67 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 46.38 | 38.55 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 37.2 | 36.32 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 36.72 | 36.19 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 32.85 | 35.98 |
| CDX95420 | Canola | nucleus | 40.1 | 35.78 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 36.72 | 35.68 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 36.72 | 35.51 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 46.38 | 32.76 |
| CDY27504 | Canola | nucleus | 42.51 | 32.35 |
| CDY69488 | Canola | nucleus | 43.0 | 32.13 |
| CDY69953 | Canola | nucleus | 43.48 | 31.91 |
| CDY42115 | Canola | nucleus | 42.51 | 31.77 |
| Zm00001d044107_P001 | Maize | nucleus | 40.1 | 31.44 |
| CDY70097 | Canola | nucleus | 35.75 | 31.36 |
| CDX84981 | Canola | nucleus | 43.0 | 30.9 |
| CDY12705 | Canola | nucleus | 42.51 | 30.88 |
| CDY24688 | Canola | nucleus | 47.34 | 30.72 |
| CDY03859 | Canola | nucleus | 42.51 | 30.66 |
| Os01t0637800-00 | Rice | mitochondrion, nucleus, plastid | 41.06 | 30.58 |
| CDY01906 | Canola | nucleus | 42.03 | 30.53 |
| CDY05611 | Canola | nucleus | 46.86 | 30.5 |
| CDY33891 | Canola | nucleus | 46.86 | 30.5 |
| CDY05270 | Canola | nucleus | 47.34 | 30.43 |
| CDY49581 | Canola | nucleus | 34.78 | 30.38 |
| CDX71075 | Canola | nucleus | 35.27 | 30.29 |
| CDX96033 | Canola | nucleus | 41.55 | 30.28 |
| CDY54094 | Canola | nucleus | 41.55 | 30.18 |
| CDX88722 | Canola | nucleus | 35.27 | 30.17 |
| CDX80230 | Canola | nucleus | 34.3 | 29.96 |
| CDX77436 | Canola | nucleus | 36.72 | 29.23 |
| CDY34949 | Canola | nucleus | 44.93 | 29.06 |
| CDX99864 | Canola | nucleus | 44.93 | 29.06 |
| EES01143 | Sorghum | nucleus | 41.06 | 29.01 |
| CDY61190 | Canola | nucleus | 36.23 | 28.74 |
| CDY49231 | Canola | nucleus | 36.72 | 28.36 |
| CDX80085 | Canola | nucleus | 27.05 | 28.14 |
| CDX86354 | Canola | nucleus | 36.23 | 27.99 |
| CDX94829 | Canola | nucleus | 36.72 | 27.84 |
| CDX85285 | Canola | nucleus | 36.23 | 27.78 |
| CDX93006 | Canola | nucleus | 36.72 | 27.74 |
| CDY45895 | Canola | nucleus | 34.3 | 27.63 |
| CDY64694 | Canola | nucleus | 36.23 | 27.37 |
| CDY13311 | Canola | nucleus | 31.4 | 26.64 |
| CDX86040 | Canola | nucleus | 35.75 | 26.62 |
| CDX86041 | Canola | nucleus | 35.75 | 26.62 |
| CDX99125 | Canola | nucleus | 35.75 | 26.62 |
| CDX78153 | Canola | nucleus | 31.4 | 26.53 |
| CDX73572 | Canola | nucleus | 31.4 | 26.53 |
| CDY00083 | Canola | nucleus | 34.3 | 26.3 |
| CDX67561 | Canola | nucleus | 30.43 | 26.25 |
| CDY19978 | Canola | nucleus | 33.82 | 26.22 |
| CDY70282 | Canola | nucleus | 37.2 | 26.19 |
| CDX74100 | Canola | nucleus | 34.78 | 21.36 |
| CDX86221 | Canola | nucleus | 6.76 | 20.0 |
| CDY35782 | Canola | nucleus | 19.32 | 19.51 |
| CDY58600 | Canola | nucleus | 22.22 | 14.24 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 45.41 | 7.48 |
Protein Annotations
| EnsemblPlants:CDY49063 | EnsemblPlantsGene:GSBRNA2T00092283001 | Gene3D:1.10.10.60 | GO:A0A078IJ11 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF688 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY49063 | ProteinID:CDY49063.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EEBE72 | UniProt:A0A078IJ11 | MapMan:15.5.2.1 | : |
Description
BnaC05g48910DBnaC05g48910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJ11]
Coordinates
chrLK032808:-:103665..104726
Molecular Weight (calculated)
23705.2 Da
IEP (calculated)
10.146
GRAVY (calculated)
-0.700
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKKKTGIRK ERIPAQKEEE GTVRKGPWTM EEDLILFNYI LNHGEGLWNS VAKASGLKRT GKSCRLRWLN YLRPDVRRGN ITAEEQLLII QLHAKLGNRW
101: SKIAKYLPGR TDNEIKNFWR TKIQRHVKFS SSVNTINTRH CSGNSQSSVI TATDQGSSSK GFDMAESLIS PATTTTSFHM MEQSNDSYWN VEDLWPLQLL
201: NGDHQVI
101: SKIAKYLPGR TDNEIKNFWR TKIQRHVKFS SSVNTINTRH CSGNSQSSVI TATDQGSSSK GFDMAESLIS PATTTTSFHM MEQSNDSYWN VEDLWPLQLL
201: NGDHQVI
001: METTMKKKGR VKATITSQKE EEGTVRKGPW TMEEDFILFN YILNHGEGLW NSVAKASGLK RTGKSCRLRW LNYLRPDVRR GNITEEEQLL IIQLHAKLGN
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
Arabidopsis Description
MYB57Transcription factor MYB57 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.