Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G229500.1 | Wheat | nucleus | 54.32 | 71.9 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 54.32 | 71.23 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 53.96 | 70.42 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 53.96 | 70.09 |
| KRG94092 | Soybean | nucleus | 20.86 | 65.17 |
| Solyc02g086690.2.1 | Tomato | nucleus | 21.22 | 62.77 |
| VIT_14s0066g01090.t01 | Wine grape | nucleus | 33.09 | 48.68 |
| Zm00001d044107_P001 | Maize | nucleus | 45.68 | 48.11 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 33.45 | 47.45 |
| Solyc02g067760.2.1 | Tomato | nucleus | 31.65 | 45.13 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 31.65 | 45.13 |
| EES01143 | Sorghum | nucleus | 47.12 | 44.71 |
| KRG94086 | Soybean | nucleus | 32.73 | 44.17 |
| KRH07188 | Soybean | nucleus | 32.01 | 42.79 |
| CDY37512 | Canola | nucleus | 30.58 | 42.29 |
| AT3G01530.1 | Thale cress | nucleus | 31.3 | 42.23 |
| CDX91944 | Canola | nucleus | 31.3 | 42.03 |
| PGSC0003DMT400001278 | Potato | nucleus | 31.3 | 42.03 |
| KRG93265 | Soybean | nucleus | 30.94 | 41.95 |
| KRH56587 | Soybean | nucleus | 30.94 | 41.75 |
| CDX74303 | Canola | nucleus | 30.94 | 41.35 |
| Bra001005.1-P | Field mustard | nucleus | 30.94 | 41.35 |
| AT5G40350.1 | Thale cress | nucleus | 31.65 | 41.12 |
| CDY49063 | Canola | nucleus | 30.58 | 41.06 |
| Bra039108.1-P | Field mustard | nucleus | 30.22 | 40.98 |
| AT3G27810.1 | Thale cress | nucleus | 32.01 | 39.38 |
| CDY00146 | Canola | nucleus | 23.02 | 38.55 |
| CDX86471 | Canola | nucleus | 31.65 | 37.93 |
| Bra025300.1-P | Field mustard | nucleus | 31.65 | 37.93 |
| Bra039067.1-P | Field mustard | nucleus | 31.65 | 37.93 |
| CDY20036 | Canola | nucleus | 31.65 | 37.93 |
| CDY44433 | Canola | nucleus | 31.65 | 37.93 |
| Os11t0700500-01 | Rice | nucleus | 28.42 | 33.33 |
| Os12t0567300-00 | Rice | nucleus | 28.06 | 32.23 |
| Os11t0684000-01 | Rice | nucleus | 32.37 | 31.58 |
| Os07t0688200-01 | Rice | nucleus | 33.09 | 30.67 |
| Os01t0298400-01 | Rice | extracellular, nucleus | 31.65 | 30.03 |
| Os03t0315400-01 | Rice | nucleus | 35.25 | 29.79 |
| Os03t0142600-00 | Rice | nucleus | 25.9 | 29.15 |
| Os02t0618400-02 | Rice | nucleus | 28.42 | 27.34 |
| Os01t0128000-01 | Rice | nucleus | 33.45 | 26.57 |
| Os01t0975300-01 | Rice | vacuole | 19.78 | 26.19 |
| Os04t0508500-01 | Rice | nucleus | 25.9 | 25.62 |
| Os05t0132700-01 | Rice | nucleus | 13.67 | 17.67 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 37.41 | 8.27 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A0P0V5Q1 | ProteinID:BAS73352.1 | GO:GO:0000981 | GO:GO:0001135 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | EnsemblPlantsGene:Os01g0637800 | EnsemblPlants:Os01t0637800-00 | PFAM:PF00249 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF531 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI0003938FF3 | SEG:seg | : | : | : | : |
Description
myb transcription factor 8, transcription factor MYB8Similar to Transcription factor (Fragment). (Os01t0637800-00)
Coordinates
chr1:+:25592575..25593523
Molecular Weight (calculated)
30856.3 Da
IEP (calculated)
8.812
GRAVY (calculated)
-0.569
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: SLVTSSRLYK HRRRRVSDQS GSKCAAANPP PPHPSLLCSA LCSSRHASYS MATRMCGRAG EPAVRKGPWT LEEDLILVSY ISQNGEGSWD NLARSAGLNR
101: NGKSCRLRWL NYLRPGVRRG SITPEEDMVI RELHSRWGNR WSKIAKHLPG RTDNEIKNYW RTKIHRKPRG RSQLLQEPCE DAMGMGMSTT TSEAASTSAS
201: SGQSQASPGV WDEYMQASSF PHPELVSFAA DHHLEMAGVG EVAAAAAAQF VPTEFGFNDG FWNFVDNFWE TMPVSDVV
101: NGKSCRLRWL NYLRPGVRRG SITPEEDMVI RELHSRWGNR WSKIAKHLPG RTDNEIKNYW RTKIHRKPRG RSQLLQEPCE DAMGMGMSTT TSEAASTSAS
201: SGQSQASPGV WDEYMQASSF PHPELVSFAA DHHLEMAGVG EVAAAAAAQF VPTEFGFNDG FWNFVDNFWE TMPVSDVV
001: MEKRESSGGS GSGDAEVRKG PWTMEEDLIL INYIANHGEG VWNSLAKSAG LKRTGKSCRL RWLNYLRPDV RRGNITPEEQ LTIMELHAKW GNRWSKIAKH
101: LPGRTDNEIK NFWRTKIQKY IIKSGETTTV GSQSSEFINH HATTSHVMND TQETMDMYSP TTSYQHASNI NQQLNYGNYV PESGSIMMPL SVDQSEQNYW
201: SVDDLWPMNI YNGN
101: LPGRTDNEIK NFWRTKIQKY IIKSGETTTV GSQSSEFINH HATTSHVMND TQETMDMYSP TTSYQHASNI NQQLNYGNYV PESGSIMMPL SVDQSEQNYW
201: SVDDLWPMNI YNGN
Arabidopsis Description
MYB24Transcription factor MYB24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.