Factsheet for Os03t0142600-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048383_P001	Maize	nucleus	75.3	80.17
EER92876	Sorghum	nucleus	81.38	79.45
Zm00001d027623_P001	Maize	nucleus	77.73	77.11
TraesCS4B01G344000.1	Wheat	nucleus	72.47	72.76
TraesCS4D01G339100.1	Wheat	nucleus	72.47	72.47
TraesCS5A01G512700.1	Wheat	nucleus	72.47	72.18
KRH62917	Soybean	nucleus	29.15	69.23
HORVU4Hr1G084360.3	Barley	nucleus	72.06	66.17
KRH55348	Soybean	nucleus	33.2	66.13
KRH11843	Soybean	nucleus	32.79	65.32
KRH33348	Soybean	nucleus	26.72	64.71
KRH75688	Soybean	nucleus	27.13	62.04
GSMUA_Achr4P29230_001	Banana	nucleus	41.3	50.0
GSMUA_Achr11P...	Banana	nucleus	41.3	47.89
GSMUA_Achr11P...	Banana	nucleus	44.13	47.39
GSMUA_Achr8P12710_001	Banana	nucleus	42.91	45.89
VIT_05s0049g02260.t01	Wine grape	nucleus	47.37	45.7
GSMUA_Achr1P03450_001	Banana	nucleus	44.94	45.68
Solyc09g090790.2.1	Tomato	nucleus	44.94	44.22
PGSC0003DMT400069955	Potato	nucleus	40.89	44.1
PGSC0003DMT400003796	Potato	nucleus	44.94	43.87
Solyc05g053150.1.1	Tomato	nucleus	40.49	43.67
KRG90311	Soybean	nucleus	45.34	43.08
KRH04452	Soybean	nucleus	46.15	43.02
KRH34553	Soybean	nucleus	45.75	42.48
KRG92245	Soybean	nucleus	43.32	42.13
AT4G13480.1	Thale cress	nucleus	43.72	41.38
VIT_14s0083g01060.t01	Wine grape	nucleus	41.3	41.3
Os02t0618400-02	Rice	nucleus	48.18	41.18
AT3G24310.1	Thale cress	nucleus	44.53	40.89
CDX77436	Canola	nucleus	42.91	40.77
CDY61190	Canola	nucleus	42.91	40.61
Os04t0508500-01	Rice	nucleus	45.75	40.21
CDY49231	Canola	nucleus	42.91	39.55
Bra015029.1-P	Field mustard	nucleus	42.91	39.11
Bra001941.1-P	Field mustard	nucleus	43.32	39.05
CDX93006	Canola	nucleus	43.32	39.05
Bra020744.1-P	Field mustard	nucleus	40.49	38.91
CDY45895	Canola	nucleus	40.49	38.91
CDX94829	Canola	nucleus	42.91	38.83
CDY64694	Canola	nucleus	42.91	38.69
Bra028369.1-P	Field mustard	nucleus	42.91	38.69
Solyc02g089190.1.1	Tomato	nucleus	36.84	38.08
CDX86354	Canola	nucleus	40.49	37.31
Bra025410.1-P	Field mustard	nucleus	40.49	37.31
PGSC0003DMT400003479	Potato	nucleus	35.22	36.55
KRH01379	Soybean	nucleus	38.06	36.43
CDX85285	Canola	nucleus	39.68	36.3
KRH33568	Soybean	nucleus	46.56	35.94
KRH45095	Soybean	nucleus	39.68	35.64
CDY00083	Canola	nucleus	38.87	35.56
AT3G30210.1	Thale cress	nucleus	39.68	35.51
Bra036202.1-P	Field mustard	nucleus	38.06	35.21
CDY19978	Canola	nucleus	38.06	35.21
KRH01378	Soybean	nucleus	39.27	34.77
Os12t0567300-00	Rice	nucleus	30.36	30.99
Os11t0700500-01	Rice	nucleus	29.15	30.38
Os01t0975300-01	Rice	vacuole	25.1	29.52
CDY35782	Canola	nucleus	23.48	28.29
Os01t0637800-00	Rice	mitochondrion, nucleus, plastid	29.15	25.9
Os11t0684000-01	Rice	nucleus	28.74	24.91
Os01t0298400-01	Rice	extracellular, nucleus	28.74	24.23
Os03t0315400-01	Rice	nucleus	31.17	23.4
Os07t0688200-01	Rice	nucleus	28.34	23.33
Os01t0128000-01	Rice	nucleus	32.39	22.86
Os05t0132700-01	Rice	nucleus	12.96	14.88

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4331584	ProteinID:ABF93917.1	ProteinID:BAF10847.1	ProteinID:BAS82233.1
ncoils:Coil	ProteinID:EAZ25537.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	EnsemblPlantsGene:Os03g0142600	EnsemblPlants:Os03t0142600-00	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF539	UniProt:Q10RX9	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0000DB44A4
RefSeq:XP_015630196.1	SEG:seg	:	:	:	:

Description

Myb transcription factor domain containing protein. (Os03t0142600-00)

Coordinates

chr3:-:2341955..2343111

Molecular Weight (calculated)

28770.1 Da

IEP (calculated)

7.086

GRAVY (calculated)

-0.879

Length

247 amino acids

Sequence
(BLAST)

001: MDEIRSLMLQ QGWRKGPWTA LEDRLLTEYV QQHGEGSWNS VAKLTGLRRS GKSCRLRWVN YLRPDLKRGK ITPDEETVIL QLHAMLGNRW SAIARCLPGR
101: TDNEIKNYWR THFKKARPSR RARAQLLHQY QLQQQQQHRQ YLHSLNLLQQ QQQQLQQQQQ QQQQQMMLLQ EQEQQSPQEE AADDSMVMMM MNDLQSKERC
201: CTAVSVVPDD CVLPADDDAI WDSLWRLVDG DGSCGEGSSG GEYWATS

Best Arabidopsis Sequence Match ( AT3G24310.1 )
(BLAST)

001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC

Arabidopsis Description

MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.