Factsheet for Bra001941.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93006	Canola	nucleus	100.0	100.0
CDX94829	Canola	nucleus	95.62	95.97
Bra015029.1-P	Field mustard	nucleus	85.04	85.98
AT3G24310.1	Thale cress	nucleus	84.31	85.87
KRH62917	Soybean	nucleus	32.12	84.62
Bra028369.1-P	Field mustard	nucleus	84.31	84.31
KRH55348	Soybean	nucleus	37.96	83.87
KRH11843	Soybean	nucleus	37.59	83.06
KRH33348	Soybean	nucleus	30.29	81.37
KRH75688	Soybean	nucleus	31.02	78.7
PGSC0003DMT400069955	Potato	nucleus	51.82	62.01
Solyc05g053150.1.1	Tomato	nucleus	50.0	59.83
KRH34553	Soybean	nucleus	56.2	57.89
KRG92245	Soybean	nucleus	53.65	57.87
VIT_05s0049g02260.t01	Wine grape	nucleus	53.65	57.42
KRG90311	Soybean	nucleus	53.65	56.54
PGSC0003DMT400003796	Potato	nucleus	52.19	56.52
Solyc09g090790.2.1	Tomato	nucleus	51.46	56.18
KRH04452	Soybean	nucleus	54.01	55.85
GSMUA_Achr4P29230_001	Banana	nucleus	38.69	51.96
GSMUA_Achr11P...	Banana	nucleus	39.05	50.23
GSMUA_Achr11P...	Banana	nucleus	41.97	50.0
GSMUA_Achr8P12710_001	Banana	nucleus	40.15	47.62
GSMUA_Achr1P03450_001	Banana	nucleus	41.97	47.33
KRH33568	Soybean	nucleus	55.11	47.19
HORVU0Hr1G005100.1	Barley	nucleus	37.23	45.33
TraesCS2A01G363800.1	Wheat	nucleus	42.34	44.62
HORVU6Hr1G057670.3	Barley	nucleus	43.8	44.44
KXG26684	Sorghum	nucleus	45.62	44.33
TraesCS2B01G381800.1	Wheat	nucleus	41.61	44.19
TraesCS6A01G227700.1	Wheat	nucleus	44.16	44.16
HORVU2Hr1G087990.1	Barley	nucleus	41.61	44.02
TraesCS2D01G361600.1	Wheat	nucleus	41.24	43.97
Zm00001d017243_P001	Maize	nucleus	44.89	43.77
Zm00001d048383_P001	Maize	nucleus	36.86	43.53
Os03t0142600-00	Rice	nucleus	39.05	43.32
TraesCS6B01G254200.1	Wheat	nucleus	43.07	43.07
TraesCS6D01G207300.1	Wheat	nucleus	43.07	42.91
Zm00001d025823_P001	Maize	nucleus	43.43	42.81
EES07157	Sorghum	nucleus	44.89	42.71
TraesCS4B01G344000.1	Wheat	nucleus	38.32	42.68
Os02t0618400-02	Rice	nucleus	44.89	42.56
Zm00001d027623_P001	Maize	nucleus	38.32	42.17
TraesCS4D01G339100.1	Wheat	nucleus	37.96	42.11
TraesCS5A01G512700.1	Wheat	nucleus	37.96	41.94
Os04t0508500-01	Rice	nucleus	42.7	41.64
EER92876	Sorghum	nucleus	38.32	41.5
Bra025410.1-P	Field mustard	nucleus	39.05	39.93
Bra036202.1-P	Field mustard	nucleus	38.69	39.7
HORVU4Hr1G084360.3	Barley	nucleus	38.69	39.41
Bra020744.1-P	Field mustard	nucleus	35.77	38.13
Bra039108.1-P	Field mustard	nucleus	27.37	36.59
Zm00001d051117_P001	Maize	nucleus	37.23	36.56
Bra001005.1-P	Field mustard	nucleus	27.01	35.58
Bra039067.1-P	Field mustard	nucleus	29.93	35.34
Bra025300.1-P	Field mustard	nucleus	29.2	34.48
Bra020289.1-P	Field mustard	nucleus	28.83	33.47
Bra006694.1-P	Field mustard	nucleus	29.56	33.47
Bra002533.1-P	Field mustard	nucleus	28.1	32.49
Bra006977.1-P	Field mustard	nucleus	28.83	32.24
Bra028550.1-P	Field mustard	nucleus	28.1	32.08
Bra018223.1-P	Field mustard	nucleus	28.47	30.95
Bra004041.1-P	Field mustard	nucleus	31.75	30.85
Bra021389.1-P	Field mustard	nucleus	30.29	30.51
Bra012482.1-P	Field mustard	nucleus	31.39	30.28
Bra004297.1-P	Field mustard	nucleus	31.39	30.28
Bra004473.1-P	Field mustard	nucleus	30.29	30.18
Bra033948.1-P	Field mustard	nucleus	31.39	30.18
Bra001202.1-P	Field mustard	nucleus	32.85	29.61
Bra020624.1-P	Field mustard	nucleus	32.85	28.3
Bra024760.1-P	Field mustard	nucleus	27.01	27.82
Bra029582.1-P	Field mustard	nucleus	32.48	27.64
Bra040274.1-P	Field mustard	nucleus	32.12	27.5
Bra010021.1-P	Field mustard	nucleus	30.66	26.01
Bra010022.1-P	Field mustard	nucleus	30.66	26.01

Protein Annotations

EnsemblPlants:Bra001941.1	EnsemblPlants:Bra001941.1-P	EnsemblPlantsGene:Bra001941	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF574	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI00025407BE	UniProt:M4CCL1	MapMan:15.5.2.1	:	:

Description

AT3G24310 (E=4e-099) MYB305, ATMYB71 | MYB305 (myb domain protein 305); DNA binding / transcription factor

Coordinates

chrA03:-:19484304..19485334

Molecular Weight (calculated)

31436.0 Da

IEP (calculated)

8.988

GRAVY (calculated)

-0.807

Length

274 amino acids

Sequence
(BLAST)

001: MSLWGVMGGG WGLVEEGWRK GPWTAEEDRL LIDYVRLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNNAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMNKIMSL LDDNNNNNND FSSSSSGSSG EGGAFYVPNQ
201: IKIPTPNSSH DPNGNGFCPV VPVPTVEANV NEDCAIWNGI WNLDLEGQES FGDGACVPRK HCFQNWPIPF NLTF

Best Arabidopsis Sequence Match ( AT3G24310.1 )
(BLAST)

001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC

Arabidopsis Description

MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.