Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G087990.1 | Barley | nucleus | 90.67 | 78.76 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 87.11 | 75.97 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 86.22 | 75.49 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 85.78 | 74.23 |
| KRH62917 | Soybean | nucleus | 31.56 | 68.27 |
| KRH33348 | Soybean | nucleus | 30.67 | 67.65 |
| KRH55348 | Soybean | nucleus | 36.89 | 66.94 |
| KRH11843 | Soybean | nucleus | 36.44 | 66.13 |
| KRH75688 | Soybean | nucleus | 30.67 | 63.89 |
| GSMUA_Achr11P... | Banana | nucleus | 51.11 | 53.99 |
| Os04t0508500-01 | Rice | nucleus | 66.67 | 53.38 |
| KXG26684 | Sorghum | nucleus | 66.22 | 52.84 |
| Zm00001d025823_P001 | Maize | nucleus | 64.0 | 51.8 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 46.67 | 51.47 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 52.0 | 50.65 |
| GSMUA_Achr11P... | Banana | nucleus | 50.22 | 49.13 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 58.22 | 48.52 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 49.78 | 46.09 |
| PGSC0003DMT400069955 | Potato | nucleus | 41.78 | 41.05 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 46.22 | 40.62 |
| Solyc09g090790.2.1 | Tomato | nucleus | 44.89 | 40.24 |
| Solyc05g053150.1.1 | Tomato | nucleus | 40.89 | 40.17 |
| KRG90311 | Soybean | nucleus | 46.22 | 40.0 |
| PGSC0003DMT400003796 | Potato | nucleus | 44.44 | 39.53 |
| KRH34553 | Soybean | nucleus | 46.67 | 39.47 |
| KRG92245 | Soybean | nucleus | 44.44 | 39.37 |
| Solyc02g089190.1.1 | Tomato | nucleus | 41.78 | 39.33 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 43.11 | 39.27 |
| KRH04452 | Soybean | nucleus | 45.78 | 38.87 |
| CDX77436 | Canola | nucleus | 44.44 | 38.46 |
| CDY61190 | Canola | nucleus | 44.44 | 38.31 |
| CDX94829 | Canola | nucleus | 45.78 | 37.73 |
| CDY49231 | Canola | nucleus | 44.89 | 37.69 |
| PGSC0003DMT400003479 | Potato | nucleus | 39.56 | 37.4 |
| Bra015029.1-P | Field mustard | nucleus | 44.89 | 37.27 |
| Bra001941.1-P | Field mustard | nucleus | 45.33 | 37.23 |
| CDX93006 | Canola | nucleus | 45.33 | 37.23 |
| AT3G24310.1 | Thale cress | nucleus | 44.44 | 37.17 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 44.44 | 37.17 |
| AT4G13480.1 | Thale cress | nucleus | 43.11 | 37.16 |
| CDY64694 | Canola | nucleus | 44.44 | 36.5 |
| Bra028369.1-P | Field mustard | nucleus | 44.44 | 36.5 |
| CDX86354 | Canola | nucleus | 42.22 | 35.45 |
| Bra025410.1-P | Field mustard | nucleus | 42.22 | 35.45 |
| CDX85285 | Canola | nucleus | 41.78 | 34.81 |
| KRH01379 | Soybean | nucleus | 39.56 | 34.5 |
| Bra036202.1-P | Field mustard | nucleus | 40.44 | 34.08 |
| CDY19978 | Canola | nucleus | 40.44 | 34.08 |
| CDY00083 | Canola | nucleus | 40.89 | 34.07 |
| Bra020744.1-P | Field mustard | nucleus | 38.67 | 33.85 |
| CDY45895 | Canola | nucleus | 38.67 | 33.85 |
| AT3G30210.1 | Thale cress | nucleus | 40.89 | 33.33 |
| KRH33568 | Soybean | nucleus | 46.22 | 32.5 |
| HORVU5Hr1G021750.2 | Barley | nucleus | 33.33 | 31.65 |
| KRH45095 | Soybean | nucleus | 37.78 | 30.91 |
| KRH01378 | Soybean | nucleus | 38.22 | 30.82 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 27.56 | 29.25 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 29.33 | 25.58 |
| CDY35782 | Canola | nucleus | 23.11 | 25.37 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 31.11 | 24.82 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 30.67 | 23.55 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 30.22 | 23.21 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 33.33 | 23.08 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 33.33 | 22.66 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 35.11 | 21.76 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 32.44 | 20.8 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 33.78 | 20.6 |
| HORVU5Hr1G022710.1 | Barley | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G005100.1 | EnsemblPlantsGene:HORVU0Hr1G005100 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | ncoils:Coil |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF574 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000B46271A | UniProt:A0A287DW09 | MapMan:15.5.2.1 | : | : |
Description
No Description!
Coordinates
chrchrUn:+:29025895..29028237
Molecular Weight (calculated)
23568.1 Da
IEP (calculated)
8.940
GRAVY (calculated)
-0.734
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAEGQLAA CWGKQDDEWR KGPWTTQEDK LLLDHVAQHG EGRWNSVSKL TGLKRSGKSC RLRWVNYLRP DLKRGKMTPQ EESTIVQLHS LWGNRWSTIA
101: RSLPGRTDNE IKNYWRTHYK KGKPSKNIER ARARFLMQRR EMQQQQQQQE LLLGQAKDVD LAGGATVGDD VDEKMVGAIX XXXXXXXXXX XXXXXXXXEE
201: LIMQDVLDFL CPMSCALLHS AGHGQ
101: RSLPGRTDNE IKNYWRTHYK KGKPSKNIER ARARFLMQRR EMQQQQQQQE LLLGQAKDVD LAGGATVGDD VDEKMVGAIX XXXXXXXXXX XXXXXXXXEE
201: LIMQDVLDFL CPMSCALLHS AGHGQ
001: MVEEVWRKGP WTAEEDRLLI EYVRVHGEGR WNSVSKLAGL KRNGKSCRLR WVNYLRPDLK RGQITPHEES IILELHAKWG NRWSTIARSL PGRTDNEIKN
101: YWRTHFKKKA KPTTNNAEKI KSRLLKRQHF KEQREIELQQ EQQLFQFDQL GMKKIISLLE ENNSSSSSDG GGDVFYYPDQ ITHSSKPFGY NSNSLEEQLQ
201: GRFSPVNIPD ANTMNEDNAI WDGFWNMDVV NGHGGNLGVV AATAACGPRK PYFHNLVIPF C
101: YWRTHFKKKA KPTTNNAEKI KSRLLKRQHF KEQREIELQQ EQQLFQFDQL GMKKIISLLE ENNSSSSSDG GGDVFYYPDQ ITHSSKPFGY NSNSLEEQLQ
201: GRFSPVNIPD ANTMNEDNAI WDGFWNMDVV NGHGGNLGVV AATAACGPRK PYFHNLVIPF C
Arabidopsis Description
AtMYB79Myb domain protein 79 [Source:UniProtKB/TrEMBL;Acc:Q9T0G9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.