Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001941.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX94829 | Canola | nucleus | 95.62 | 95.97 |
| CDY49231 | Canola | nucleus | 84.67 | 86.57 |
| CDX77436 | Canola | nucleus | 82.12 | 86.54 |
| AT3G24310.1 | Thale cress | nucleus | 84.31 | 85.87 |
| CDY61190 | Canola | nucleus | 80.66 | 84.67 |
| KRH62917 | Soybean | nucleus | 32.12 | 84.62 |
| CDY64694 | Canola | nucleus | 84.31 | 84.31 |
| KRH55348 | Soybean | nucleus | 37.96 | 83.87 |
| KRH11843 | Soybean | nucleus | 37.59 | 83.06 |
| KRH33348 | Soybean | nucleus | 30.29 | 81.37 |
| KRH75688 | Soybean | nucleus | 31.02 | 78.7 |
| PGSC0003DMT400069955 | Potato | nucleus | 51.82 | 62.01 |
| Solyc05g053150.1.1 | Tomato | nucleus | 50.0 | 59.83 |
| KRH34553 | Soybean | nucleus | 56.2 | 57.89 |
| KRG92245 | Soybean | nucleus | 53.65 | 57.87 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 53.65 | 57.42 |
| KRG90311 | Soybean | nucleus | 53.65 | 56.54 |
| PGSC0003DMT400003796 | Potato | nucleus | 52.19 | 56.52 |
| Solyc09g090790.2.1 | Tomato | nucleus | 51.46 | 56.18 |
| KRH04452 | Soybean | nucleus | 54.01 | 55.85 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 38.69 | 51.96 |
| CDY58599 | Canola | nucleus | 20.07 | 51.89 |
| GSMUA_Achr11P... | Banana | nucleus | 39.05 | 50.23 |
| GSMUA_Achr11P... | Banana | nucleus | 41.97 | 50.0 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 40.15 | 47.62 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 41.97 | 47.33 |
| KRH33568 | Soybean | nucleus | 55.11 | 47.19 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 37.23 | 45.33 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 42.34 | 44.62 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 43.8 | 44.44 |
| KXG26684 | Sorghum | nucleus | 45.62 | 44.33 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 41.61 | 44.19 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 44.16 | 44.16 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 41.61 | 44.02 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 41.24 | 43.97 |
| Zm00001d017243_P001 | Maize | nucleus | 44.89 | 43.77 |
| Zm00001d048383_P001 | Maize | nucleus | 36.86 | 43.53 |
| Os03t0142600-00 | Rice | nucleus | 39.05 | 43.32 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 43.07 | 43.07 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 43.07 | 42.91 |
| Zm00001d025823_P001 | Maize | nucleus | 43.43 | 42.81 |
| EES07157 | Sorghum | nucleus | 44.89 | 42.71 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 38.32 | 42.68 |
| CDX85422 | Canola | nucleus | 28.47 | 42.62 |
| Os02t0618400-02 | Rice | nucleus | 44.89 | 42.56 |
| Zm00001d027623_P001 | Maize | nucleus | 38.32 | 42.17 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 37.96 | 42.11 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 37.96 | 41.94 |
| Os04t0508500-01 | Rice | nucleus | 42.7 | 41.64 |
| EER92876 | Sorghum | nucleus | 38.32 | 41.5 |
| CDX86220 | Canola | nucleus | 28.47 | 40.41 |
| CDX86354 | Canola | nucleus | 39.05 | 39.93 |
| CDY19978 | Canola | nucleus | 38.69 | 39.7 |
| CDX85285 | Canola | nucleus | 39.05 | 39.63 |
| CDY00083 | Canola | nucleus | 39.05 | 39.63 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 38.69 | 39.41 |
| CDY00146 | Canola | nucleus | 23.36 | 38.55 |
| CDY45895 | Canola | nucleus | 35.77 | 38.13 |
| CDY37512 | Canola | nucleus | 27.74 | 37.81 |
| CDY49063 | Canola | nucleus | 27.74 | 36.72 |
| Zm00001d051117_P001 | Maize | nucleus | 37.23 | 36.56 |
| CDX91944 | Canola | nucleus | 27.37 | 36.23 |
| CDX74303 | Canola | nucleus | 27.01 | 35.58 |
| CDY20036 | Canola | nucleus | 29.93 | 35.34 |
| CDX86471 | Canola | nucleus | 29.56 | 34.91 |
| CDY44433 | Canola | nucleus | 29.56 | 34.91 |
| CDX95420 | Canola | nucleus | 28.47 | 33.62 |
| CDX71075 | Canola | nucleus | 29.56 | 33.61 |
| CDY70097 | Canola | nucleus | 28.83 | 33.47 |
| CDX88722 | Canola | nucleus | 29.56 | 33.47 |
| CDY49581 | Canola | nucleus | 28.1 | 32.49 |
| CDX78153 | Canola | nucleus | 28.83 | 32.24 |
| CDX67561 | Canola | nucleus | 28.1 | 32.08 |
| CDX80230 | Canola | nucleus | 27.74 | 32.07 |
| CDX73572 | Canola | nucleus | 28.47 | 31.84 |
| CDY69488 | Canola | nucleus | 31.75 | 31.41 |
| CDY13311 | Canola | nucleus | 27.74 | 31.15 |
| CDY69953 | Canola | nucleus | 31.75 | 30.85 |
| CDY35782 | Canola | nucleus | 22.99 | 30.73 |
| CDY27504 | Canola | nucleus | 30.29 | 30.51 |
| CDX96033 | Canola | nucleus | 31.39 | 30.28 |
| CDY03859 | Canola | nucleus | 31.39 | 29.97 |
| CDY01906 | Canola | nucleus | 31.02 | 29.82 |
| CDY12705 | Canola | nucleus | 31.02 | 29.82 |
| CDY54094 | Canola | nucleus | 31.02 | 29.82 |
| CDY42115 | Canola | nucleus | 29.93 | 29.6 |
| CDX84981 | Canola | nucleus | 30.66 | 29.17 |
| CDY05611 | Canola | nucleus | 32.85 | 28.3 |
| CDY33891 | Canola | nucleus | 32.85 | 28.3 |
| CDX80085 | Canola | nucleus | 20.44 | 28.14 |
| CDX86040 | Canola | nucleus | 28.47 | 28.06 |
| CDX86041 | Canola | nucleus | 28.47 | 28.06 |
| CDX99125 | Canola | nucleus | 28.47 | 28.06 |
| CDY24688 | Canola | nucleus | 32.48 | 27.9 |
| CDY05270 | Canola | nucleus | 32.48 | 27.64 |
| CDX99864 | Canola | nucleus | 32.12 | 27.5 |
| CDY34949 | Canola | nucleus | 32.12 | 27.5 |
| CDY70282 | Canola | nucleus | 25.18 | 23.47 |
| CDX74100 | Canola | nucleus | 24.45 | 19.88 |
| CDY58600 | Canola | nucleus | 17.88 | 15.17 |
| CDX86221 | Canola | nucleus | 1.09 | 4.29 |
Protein Annotations
| EnsemblPlants:CDX93006 | EnsemblPlantsGene:GSBRNA2T00154894001 | Gene3D:1.10.10.60 | GO:A0A078DUL7 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF574 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX93006 | ProteinID:CDX93006.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00025407BE | MapMan:15.5.2.1 | : |
Description
BnaA03g37280D
Coordinates
chrLK031874:-:655698..656724
Molecular Weight (calculated)
31436.0 Da
IEP (calculated)
8.988
GRAVY (calculated)
-0.807
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLWGVMGGG WGLVEEGWRK GPWTAEEDRL LIDYVRLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNNAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMNKIMSL LDDNNNNNND FSSSSSGSSG EGGAFYVPNQ
201: IKIPTPNSSH DPNGNGFCPV VPVPTVEANV NEDCAIWNGI WNLDLEGQES FGDGACVPRK HCFQNWPIPF NLTF
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNNAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMNKIMSL LDDNNNNNND FSSSSSGSSG EGGAFYVPNQ
201: IKIPTPNSSH DPNGNGFCPV VPVPTVEANV NEDCAIWNGI WNLDLEGQES FGDGACVPRK HCFQNWPIPF NLTF
001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
Arabidopsis Description
MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.