Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018223.1-P | Field mustard | nucleus | 90.65 | 100.0 |
| CDX86041 | Canola | nucleus | 99.64 | 99.64 |
| CDX86040 | Canola | nucleus | 98.56 | 98.56 |
| AT3G46130.1 | Thale cress | nucleus | 79.5 | 85.66 |
| CDX71075 | Canola | nucleus | 67.63 | 78.01 |
| CDY49581 | Canola | nucleus | 65.83 | 77.22 |
| CDY70097 | Canola | nucleus | 65.11 | 76.69 |
| CDX88722 | Canola | nucleus | 66.19 | 76.03 |
| CDX80230 | Canola | nucleus | 64.75 | 75.95 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 43.17 | 58.54 |
| Solyc11g073120.1.1 | Tomato | nucleus | 44.96 | 57.6 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 52.88 | 57.42 |
| PGSC0003DMT400040149 | Potato | nucleus | 44.96 | 57.34 |
| KRH10298 | Soybean | nucleus | 52.52 | 57.25 |
| HORVU5Hr1G021750.2 | Barley | nucleus | 48.56 | 56.96 |
| TraesCS5D01G095600.1 | Wheat | nucleus | 48.2 | 56.54 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 42.45 | 56.46 |
| KRH23019 | Soybean | nucleus | 53.6 | 56.44 |
| GSMUA_Achr10P... | Banana | nucleus | 45.68 | 56.19 |
| TraesCS5A01G083100.1 | Wheat | nucleus | 47.84 | 56.12 |
| TraesCS5B01G089200.1 | Wheat | nucleus | 47.84 | 56.12 |
| GSMUA_Achr10P... | Banana | nucleus | 41.73 | 54.72 |
| Solyc06g005330.2.1 | Tomato | nucleus | 46.4 | 54.66 |
| TraesCS4B01G143700.1 | Wheat | nucleus | 46.4 | 54.2 |
| TraesCS4D01G142300.1 | Wheat | nucleus | 46.4 | 54.2 |
| KXG29192 | Sorghum | nucleus | 44.24 | 53.95 |
| TraesCS4A01G173300.2 | Wheat | nucleus | 46.04 | 53.78 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 41.37 | 53.74 |
| KXG23736 | Sorghum | nucleus | 46.04 | 53.33 |
| KRH29850 | Soybean | nucleus | 50.72 | 53.01 |
| GSMUA_Achr10P... | Banana | nucleus | 44.96 | 52.97 |
| KRH24842 | Soybean | nucleus | 50.36 | 52.63 |
| Zm00001d048623_P002 | Maize | nucleus | 43.17 | 52.63 |
| Zm00001d030678_P001 | Maize | nucleus | 45.68 | 52.48 |
| Os12t0567300-00 | Rice | nucleus | 44.96 | 51.65 |
| Os11t0700500-01 | Rice | nucleus | 43.88 | 51.48 |
| GSMUA_Achr11P... | Banana | nucleus | 44.6 | 51.45 |
| Zm00001d041576_P001 | Maize | nucleus | 45.68 | 50.8 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 43.17 | 50.63 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 43.53 | 50.21 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 43.88 | 49.8 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 41.73 | 49.15 |
| CDY58599 | Canola | nucleus | 18.35 | 48.11 |
| TraesCS1D01G043300.1 | Wheat | nucleus | 39.93 | 43.7 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 40.29 | 41.79 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 38.85 | 41.06 |
| TraesCS3D01G540600.1 | Wheat | nucleus | 37.41 | 40.62 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 37.41 | 40.31 |
| TraesCS3A01G535100.1 | Wheat | nucleus | 37.41 | 40.0 |
| TraesCS3B01G612200.2 | Wheat | nucleus | 37.77 | 39.77 |
| CDX78153 | Canola | nucleus | 33.09 | 37.55 |
| KXG29190 | Sorghum | nucleus | 28.42 | 37.26 |
| CDX91944 | Canola | nucleus | 27.7 | 37.2 |
| CDY37512 | Canola | nucleus | 26.62 | 36.82 |
| CDX73572 | Canola | nucleus | 32.37 | 36.73 |
| CDX85422 | Canola | nucleus | 24.1 | 36.61 |
| CDX74303 | Canola | nucleus | 27.34 | 36.54 |
| CDX67561 | Canola | nucleus | 31.3 | 36.25 |
| CDY49063 | Canola | nucleus | 26.62 | 35.75 |
| CDY13311 | Canola | nucleus | 30.94 | 35.25 |
| CDY00146 | Canola | nucleus | 20.86 | 34.94 |
| Os01t0975300-01 | Rice | vacuole | 26.26 | 34.76 |
| CDX86220 | Canola | nucleus | 24.1 | 34.72 |
| CDX95420 | Canola | nucleus | 28.78 | 34.48 |
| OQU77249 | Sorghum | nucleus | 38.13 | 34.42 |
| CDY20036 | Canola | nucleus | 27.34 | 32.76 |
| CDX86471 | Canola | nucleus | 26.98 | 32.33 |
| CDY44433 | Canola | nucleus | 26.98 | 32.33 |
| CDX80085 | Canola | nucleus | 23.02 | 32.16 |
| Zm00001d035605_P001 | Maize | nucleus | 37.77 | 32.11 |
| EES17592 | Sorghum | nucleus | 38.13 | 31.74 |
| CDY27504 | Canola | nucleus | 30.22 | 30.88 |
| CDX77436 | Canola | nucleus | 28.42 | 30.38 |
| CDY42115 | Canola | nucleus | 29.86 | 29.96 |
| CDX84981 | Canola | nucleus | 30.94 | 29.86 |
| CDX85285 | Canola | nucleus | 28.78 | 29.63 |
| CDY00083 | Canola | nucleus | 28.78 | 29.63 |
| CDY19978 | Canola | nucleus | 28.42 | 29.59 |
| CDY45895 | Canola | nucleus | 27.34 | 29.57 |
| CDY61190 | Canola | nucleus | 27.7 | 29.5 |
| CDY49231 | Canola | nucleus | 28.42 | 29.48 |
| CDY03859 | Canola | nucleus | 30.22 | 29.27 |
| CDY69488 | Canola | nucleus | 29.14 | 29.24 |
| CDX96033 | Canola | nucleus | 29.86 | 29.23 |
| CDY01906 | Canola | nucleus | 29.86 | 29.12 |
| CDX86354 | Canola | nucleus | 28.06 | 29.1 |
| CDY69953 | Canola | nucleus | 29.14 | 28.72 |
| Zm00001d035604_P001 | Maize | nucleus | 37.77 | 28.53 |
| CDX93006 | Canola | nucleus | 28.06 | 28.47 |
| CDY64694 | Canola | nucleus | 28.06 | 28.47 |
| CDY12705 | Canola | nucleus | 29.14 | 28.42 |
| CDX94829 | Canola | nucleus | 27.7 | 28.21 |
| CDY54094 | Canola | nucleus | 28.78 | 28.07 |
| CDY24688 | Canola | nucleus | 28.42 | 24.76 |
| CDY05270 | Canola | nucleus | 28.42 | 24.53 |
| CDY05611 | Canola | nucleus | 28.06 | 24.53 |
| CDY33891 | Canola | nucleus | 28.06 | 24.53 |
| CDX99864 | Canola | nucleus | 28.06 | 24.38 |
| CDY34949 | Canola | nucleus | 28.06 | 24.38 |
| CDY35782 | Canola | nucleus | 17.27 | 23.41 |
| CDY70282 | Canola | nucleus | 23.74 | 22.45 |
| CDX74100 | Canola | nucleus | 22.66 | 18.69 |
| CDY58600 | Canola | nucleus | 17.63 | 15.17 |
| CDX86221 | Canola | nucleus | 3.6 | 14.29 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078EAK4 | EnsemblPlants:CDX99125 | ProteinID:CDX99125 | ProteinID:CDX99125.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00107281001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF484 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDC3F9 | SEG:seg |
Description
BnaA06g18160D
Coordinates
chrLK031908:-:538753..539756
Molecular Weight (calculated)
32751.6 Da
IEP (calculated)
9.465
GRAVY (calculated)
-1.095
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKQAEKEHY SNIRDKERQR EKKKKEMNMM QEENRKGPWT EQEDIILVNF VHLFGDRRWD FIAKVSGLNR TGKSCRLRWV NYLHPGLKRG KMTPQEERLV
101: TELHAKWGNR WSKIARKLPG RTDNEIKNYW RTHMRKKAQE KKRHVSPSSS CSNCCSSSMT TTNTQDVSFE SRMSSGKVSF YDTGGNREMN QEETKDGYSM
201: DDIWKEIDHS AVNIIQPVKD IYLEQSYCLS YPNMASPTWE SSLDSIWKME EDKSKMSSFG NDQFPFCFQH SRSPWSSG
101: TELHAKWGNR WSKIARKLPG RTDNEIKNYW RTHMRKKAQE KKRHVSPSSS CSNCCSSSMT TTNTQDVSFE SRMSSGKVSF YDTGGNREMN QEETKDGYSM
201: DDIWKEIDHS AVNIIQPVKD IYLEQSYCLS YPNMASPTWE SSLDSIWKME EDKSKMSSFG NDQFPFCFQH SRSPWSSG
001: MKMMQEEGNR KGPWTEQEDI LLVNFVHLFG DRRWDFIAKV SGLNRTGKSC RLRWVNYLHP GLKRGKMTPQ EERLVLELHA KWGNRWSKIA RKLPGRTDNE
101: IKNYWRTHMR KKAQEKKRPV SPTSSFSNCS SSSVTTTTTN TQDTSCHSRK SSGEVSFYDT GGSRSTREMN QENEDVYSLD DIWREIDHSA VNIIKPVKDI
201: YSEQSHCLSY PNLASPSWES SLDSIWNMDA DKSKISSYFA NDQFPFCFQH SRSPWSSG
101: IKNYWRTHMR KKAQEKKRPV SPTSSFSNCS SSSVTTTTTN TQDTSCHSRK SSGEVSFYDT GGSRSTREMN QENEDVYSLD DIWREIDHSA VNIIKPVKDI
201: YSEQSHCLSY PNLASPSWES SLDSIWNMDA DKSKISSYFA NDQFPFCFQH SRSPWSSG
Arabidopsis Description
ATMYB48myb domain protein 48 [Source:TAIR;Acc:AT3G46130]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.