Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85422 | Canola | nucleus | 90.16 | 95.08 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 49.74 | 75.0 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 58.55 | 62.09 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 48.7 | 53.71 |
| Solyc12g099130.1.1 | Tomato | nucleus | 65.28 | 53.62 |
| Bra010021.1-P | Field mustard | nucleus | 89.12 | 53.25 |
| Bra010022.1-P | Field mustard | nucleus | 89.12 | 53.25 |
| PGSC0003DMT400011745 | Potato | nucleus | 64.25 | 52.99 |
| CDY58599 | Canola | nucleus | 29.02 | 52.83 |
| Solyc12g099120.1.1 | Tomato | nucleus | 66.84 | 52.23 |
| PGSC0003DMT400011750 | Potato | nucleus | 61.66 | 51.74 |
| CDY05611 | Canola | nucleus | 83.94 | 50.94 |
| CDY33891 | Canola | nucleus | 83.94 | 50.94 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 65.28 | 49.22 |
| GSMUA_Achr11P... | Banana | nucleus | 66.32 | 48.85 |
| Solyc01g057910.2.1 | Tomato | nucleus | 72.54 | 48.78 |
| CDX95420 | Canola | nucleus | 58.03 | 48.28 |
| PGSC0003DMT400022600 | Potato | nucleus | 73.58 | 47.81 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 64.25 | 47.69 |
| GSMUA_Achr11P... | Banana | nucleus | 63.73 | 46.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 64.25 | 46.44 |
| AT5G49620.2 | Thale cress | nucleus | 76.68 | 46.11 |
| CDY24688 | Canola | nucleus | 76.17 | 46.08 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 72.54 | 45.75 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 63.73 | 45.72 |
| CDY05270 | Canola | nucleus | 75.65 | 45.34 |
| CDX99864 | Canola | nucleus | 75.13 | 45.31 |
| CDY34949 | Canola | nucleus | 75.13 | 45.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 65.8 | 45.2 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 62.69 | 44.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 61.66 | 43.27 |
| PGSC0003DMT400011748 | Potato | nucleus | 65.8 | 43.05 |
| Solyc12g099140.1.1 | Tomato | nucleus | 66.32 | 42.67 |
| KRH02414 | Soybean | nucleus | 70.98 | 42.55 |
| Solyc05g053330.2.1 | Tomato | nucleus | 68.91 | 41.82 |
| KRH50671 | Soybean | nucleus | 69.95 | 41.54 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 62.18 | 41.52 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 62.69 | 41.3 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 67.88 | 41.07 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 67.88 | 41.07 |
| TraesCSU01G069000.1 | Wheat | nucleus | 61.66 | 41.03 |
| CDY00146 | Canola | nucleus | 35.23 | 40.96 |
| CDY27504 | Canola | nucleus | 57.51 | 40.81 |
| CDY37512 | Canola | nucleus | 42.49 | 40.8 |
| CDX80085 | Canola | nucleus | 41.97 | 40.7 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 58.55 | 40.65 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 66.84 | 40.57 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 58.03 | 40.29 |
| TraesCS4D01G142900.1 | Wheat | nucleus | 61.14 | 40.27 |
| PGSC0003DMT400069841 | Potato | nucleus | 67.36 | 40.12 |
| CDY49063 | Canola | nucleus | 43.01 | 40.1 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 57.51 | 39.93 |
| CDY70282 | Canola | nucleus | 60.62 | 39.8 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 58.03 | 39.72 |
| KRH36928 | Soybean | nucleus | 69.95 | 39.71 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 59.59 | 39.25 |
| CDY20036 | Canola | nucleus | 47.15 | 39.22 |
| CDX91944 | Canola | nucleus | 41.97 | 39.13 |
| KRG97314 | Soybean | nucleus | 68.91 | 39.0 |
| CDX86471 | Canola | nucleus | 46.63 | 38.79 |
| CDY44433 | Canola | nucleus | 46.63 | 38.79 |
| KXG39500 | Sorghum | nucleus | 67.36 | 38.69 |
| Zm00001d028930_P001 | Maize | nucleus | 67.36 | 38.69 |
| CDX74303 | Canola | nucleus | 41.45 | 38.46 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 52.85 | 37.5 |
| TraesCS3D01G014800.1 | Wheat | nucleus | 53.89 | 37.41 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 59.07 | 37.13 |
| GSMUA_Achr11P... | Banana | nucleus | 65.28 | 36.63 |
| CDX96033 | Canola | nucleus | 53.89 | 36.62 |
| EES00624 | Sorghum | nucleus | 58.03 | 36.6 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 61.14 | 36.53 |
| CDY01906 | Canola | nucleus | 53.89 | 36.49 |
| CDY69488 | Canola | nucleus | 52.33 | 36.46 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 61.14 | 36.42 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 58.03 | 36.36 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 61.14 | 36.31 |
| Zm00001d040594_P001 | Maize | nucleus | 56.99 | 36.3 |
| KXG36991 | Sorghum | nucleus | 64.25 | 36.26 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 61.14 | 36.2 |
| CDY69953 | Canola | nucleus | 52.85 | 36.17 |
| Zm00001d047579_P001 | Maize | nucleus | 65.28 | 36.1 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 52.85 | 35.54 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 67.88 | 35.5 |
| CDY12705 | Canola | nucleus | 52.33 | 35.44 |
| CDY54094 | Canola | nucleus | 51.81 | 35.09 |
| Zm00001d007191_P001 | Maize | nucleus | 62.69 | 34.87 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 59.59 | 34.74 |
| EES17207 | Sorghum | nucleus | 60.62 | 34.72 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 58.55 | 34.66 |
| CDY42115 | Canola | nucleus | 49.74 | 34.66 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 58.03 | 34.15 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 58.55 | 34.04 |
| CDY03859 | Canola | nucleus | 50.26 | 33.8 |
| CDX84981 | Canola | nucleus | 49.74 | 33.33 |
| Zm00001d030644_P001 | Maize | nucleus | 60.62 | 33.33 |
| Zm00001d009066_P001 | Maize | nucleus | 54.4 | 33.02 |
| Zm00001d010933_P001 | Maize | nucleus | 62.69 | 32.97 |
| Zm00001d024726_P001 | Maize | nucleus | 60.1 | 32.68 |
| Zm00001d048647_P001 | Maize | nucleus | 59.07 | 32.39 |
| CDX74100 | Canola | nucleus | 55.96 | 32.05 |
| EES10257 | Sorghum | nucleus | 60.1 | 31.78 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 56.99 | 30.3 |
| KXG21220 | Sorghum | nucleus | 63.73 | 30.3 |
| CDX77436 | Canola | nucleus | 40.41 | 30.0 |
| CDY61190 | Canola | nucleus | 40.41 | 29.89 |
| Zm00001d024725_P001 | Maize | nucleus | 62.69 | 29.8 |
| CDY70097 | Canola | nucleus | 36.27 | 29.66 |
| CDX71075 | Canola | nucleus | 36.27 | 29.05 |
| CDX80230 | Canola | nucleus | 35.23 | 28.69 |
| CDY49581 | Canola | nucleus | 35.23 | 28.69 |
| CDX94829 | Canola | nucleus | 40.41 | 28.57 |
| CDX93006 | Canola | nucleus | 40.41 | 28.47 |
| CDY64694 | Canola | nucleus | 40.41 | 28.47 |
| CDX88722 | Canola | nucleus | 35.23 | 28.1 |
| CDY49231 | Canola | nucleus | 38.86 | 27.99 |
| CDX73572 | Canola | nucleus | 35.23 | 27.76 |
| CDX78153 | Canola | nucleus | 35.23 | 27.76 |
| CDY45895 | Canola | nucleus | 36.79 | 27.63 |
| CDX86354 | Canola | nucleus | 38.34 | 27.61 |
| CDY13311 | Canola | nucleus | 34.72 | 27.46 |
| CDX67561 | Canola | nucleus | 33.68 | 27.08 |
| CDX85285 | Canola | nucleus | 37.82 | 27.04 |
| Os05t0132700-01 | Rice | nucleus | 30.05 | 26.98 |
| CDY00083 | Canola | nucleus | 37.31 | 26.67 |
| CDY19978 | Canola | nucleus | 36.79 | 26.59 |
| KXG21221 | Sorghum | nucleus | 63.73 | 25.79 |
| CDX86040 | Canola | nucleus | 34.72 | 24.1 |
| CDX86041 | Canola | nucleus | 34.72 | 24.1 |
| CDX99125 | Canola | nucleus | 34.72 | 24.1 |
| CDY35782 | Canola | nucleus | 21.24 | 20.0 |
| CDY58600 | Canola | nucleus | 28.5 | 17.03 |
| CDX86221 | Canola | nucleus | 3.63 | 10.0 |
Protein Annotations
| EnsemblPlants:CDX86220 | EnsemblPlantsGene:GSBRNA2T00144315001 | Gene3D:1.10.10.60 | GO:A0A078DAE7 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF743 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX86220 | ProteinID:CDX86220.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDB692 | MapMan:15.5.2.1 | : |
Description
BnaA06g29370D
Coordinates
chrLK031845:+:437961..439459
Molecular Weight (calculated)
23057.4 Da
IEP (calculated)
10.402
GRAVY (calculated)
-0.984
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGKRSLEIN KNMGDFENNV DDEMDLRRGP WTVEEDFKLS NYISTLGEGR WNSLARCAGL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHSRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLRCDVNSQ QFKDTMRYLW MPRLVERIQA ASASSTTVLD HVIRRRSQQQ QYQHRPFGFN EQP
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLRCDVNSQ QFKDTMRYLW MPRLVERIQA ASASSTTVLD HVIRRRSQQQ QYQHRPFGFN EQP
001: MEDYERINSN SPTHEEDSDV RKGPWTEEED AILVNFVSIH GDARWNHIAR SSGLKRTGKS CRLRWLNYLR PDVRRGNITL EEQFMILKLH SLWGNRWSKI
101: AQYLPGRTDN EIKNYWRTRV QKQAKHLRCD VNSNLFKETM RNVWMPRLVE RINAQSLPTT CEQVESMITD PSQPVNEPSP VEPGFVQFSQ NHHQQFVPAT
201: ELSATSSNSP AETFSDVRGG VVNGSGYDPS GQTGFGEFND WGCVGGDNMW TDEESFWFLQ DQFCPDTTSY SYN
101: AQYLPGRTDN EIKNYWRTRV QKQAKHLRCD VNSNLFKETM RNVWMPRLVE RINAQSLPTT CEQVESMITD PSQPVNEPSP VEPGFVQFSQ NHHQQFVPAT
201: ELSATSSNSP AETFSDVRGG VVNGSGYDPS GQTGFGEFND WGCVGGDNMW TDEESFWFLQ DQFCPDTTSY SYN
Arabidopsis Description
ATMYB2ATMYB2 [Source:UniProtKB/TrEMBL;Acc:Q39028]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.