Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G096000.1 | Wheat | nucleus | 95.48 | 96.65 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 93.98 | 95.71 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 80.12 | 73.28 |
| CDX85422 | Canola | nucleus | 34.04 | 61.75 |
| CDX86220 | Canola | nucleus | 34.04 | 58.55 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 51.81 | 54.09 |
| Os07t0688200-01 | Rice | nucleus | 46.69 | 51.67 |
| PGSC0003DMT400011745 | Potato | nucleus | 34.94 | 49.57 |
| PGSC0003DMT400011750 | Potato | nucleus | 34.04 | 49.13 |
| Solyc12g099130.1.1 | Tomato | nucleus | 34.64 | 48.94 |
| Solyc12g099120.1.1 | Tomato | nucleus | 34.94 | 46.96 |
| AT1G48000.1 | Thale cress | nucleus | 32.83 | 44.86 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 39.16 | 42.48 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 35.54 | 42.45 |
| Solyc01g057910.2.1 | Tomato | nucleus | 36.45 | 42.16 |
| PGSC0003DMT400022600 | Potato | nucleus | 36.75 | 41.08 |
| KXG36991 | Sorghum | nucleus | 41.57 | 40.35 |
| Solyc05g053330.2.1 | Tomato | nucleus | 38.25 | 39.94 |
| KRH02414 | Soybean | nucleus | 38.25 | 39.44 |
| PGSC0003DMT400011748 | Potato | nucleus | 34.94 | 39.32 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 35.84 | 38.76 |
| Solyc12g099140.1.1 | Tomato | nucleus | 34.94 | 38.67 |
| Zm00001d007191_P001 | Maize | nucleus | 40.36 | 38.62 |
| PGSC0003DMT400069841 | Potato | nucleus | 37.65 | 38.58 |
| Bra001202.1-P | Field mustard | nucleus | 35.24 | 38.49 |
| CDY33891 | Canola | nucleus | 36.45 | 38.05 |
| CDY05611 | Canola | nucleus | 36.45 | 38.05 |
| Bra020624.1-P | Field mustard | nucleus | 36.45 | 38.05 |
| KRH36928 | Soybean | nucleus | 38.86 | 37.94 |
| Bra010021.1-P | Field mustard | nucleus | 36.75 | 37.77 |
| Bra010022.1-P | Field mustard | nucleus | 36.75 | 37.77 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 24.1 | 37.56 |
| KRH50671 | Soybean | nucleus | 36.75 | 37.54 |
| KRG97314 | Soybean | nucleus | 38.25 | 37.24 |
| CDY24688 | Canola | nucleus | 35.54 | 36.99 |
| AT5G49620.2 | Thale cress | nucleus | 35.54 | 36.76 |
| CDY05270 | Canola | nucleus | 35.54 | 36.65 |
| AT3G06490.1 | Thale cress | nucleus | 35.54 | 36.53 |
| Bra029582.1-P | Field mustard | nucleus | 35.24 | 36.34 |
| CDY34949 | Canola | nucleus | 34.94 | 36.25 |
| CDX99864 | Canola | nucleus | 34.94 | 36.25 |
| Bra040274.1-P | Field mustard | nucleus | 34.94 | 36.25 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 34.94 | 35.58 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 20.18 | 35.45 |
| CDY70282 | Canola | nucleus | 29.22 | 32.99 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 33.73 | 31.91 |
| TraesCS5B01G089200.1 | Wheat | nucleus | 22.59 | 31.65 |
| TraesCS3B01G612200.2 | Wheat | nucleus | 23.8 | 29.92 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 22.89 | 29.46 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 24.1 | 29.2 |
| TraesCS4B01G143700.1 | Wheat | nucleus | 20.78 | 28.99 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 21.39 | 28.86 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 21.99 | 27.24 |
| CDX74100 | Canola | nucleus | 27.41 | 27.0 |
| CDY58600 | Canola | nucleus | 18.37 | 18.89 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF743 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS2B01G112600 | EnsemblPlants:TraesCS2B01G112600.1 |
| TIGR:cd00167 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:75847392..75848390
Molecular Weight (calculated)
36363.0 Da
IEP (calculated)
5.407
GRAVY (calculated)
-0.353
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYDQRGLRG EEAAAAAVGE EEMLRRGPWT VEEDVLLANY IAANGEGRWN ALARRAGLKR TGKSCRLRWL NYLRPDLRRG GMTAEEQLLV LELHARWGNR
101: WSKIAQHLPG RTDNEIKNYW RTRVQRHAKQ LRCDVGSQRF RDLVRGLWIP RLLERIHAAA NNSGDGDVIA QATAAALPVA ADGRCWPVDD VFDLGPGAAA
201: DVELSCTTAL SSSSSVSTDG CGVLQPLPAP APMVATAESA RGSVIISAAM HDTALWQPPQ THGGLMMTQE QQHHQQAESQ PQLLGAETWW SDQTSLPAGL
301: YADVGFPELE FGGETMWGAC ADDLWCTDML GL
101: WSKIAQHLPG RTDNEIKNYW RTRVQRHAKQ LRCDVGSQRF RDLVRGLWIP RLLERIHAAA NNSGDGDVIA QATAAALPVA ADGRCWPVDD VFDLGPGAAA
201: DVELSCTTAL SSSSSVSTDG CGVLQPLPAP APMVATAESA RGSVIISAAM HDTALWQPPQ THGGLMMTQE QQHHQQAESQ PQLLGAETWW SDQTSLPAGL
301: YADVGFPELE FGGETMWGAC ADDLWCTDML GL
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.