Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G097200.1 | Wheat | nucleus | 73.55 | 81.9 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 73.28 | 81.1 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 73.28 | 80.12 |
| CDX85422 | Canola | nucleus | 30.3 | 60.11 |
| CDX86220 | Canola | nucleus | 30.3 | 56.99 |
| Os07t0688200-01 | Rice | nucleus | 41.6 | 50.33 |
| PGSC0003DMT400011745 | Potato | nucleus | 31.13 | 48.29 |
| PGSC0003DMT400011750 | Potato | nucleus | 30.3 | 47.83 |
| Solyc12g099130.1.1 | Tomato | nucleus | 30.58 | 47.23 |
| Solyc12g099120.1.1 | Tomato | nucleus | 31.13 | 45.75 |
| AT1G48000.1 | Thale cress | nucleus | 28.37 | 42.39 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 42.7 | 42.01 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 33.33 | 41.3 |
| Solyc01g057910.2.1 | Tomato | nucleus | 31.68 | 40.07 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 33.61 | 39.87 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 30.58 | 39.36 |
| PGSC0003DMT400022600 | Potato | nucleus | 31.68 | 38.72 |
| KXG36991 | Sorghum | nucleus | 35.54 | 37.72 |
| PGSC0003DMT400011748 | Potato | nucleus | 30.3 | 37.29 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 21.76 | 37.26 |
| Bra001202.1-P | Field mustard | nucleus | 31.13 | 37.17 |
| CDY05611 | Canola | nucleus | 32.51 | 37.11 |
| Bra020624.1-P | Field mustard | nucleus | 32.51 | 37.11 |
| CDY33891 | Canola | nucleus | 32.51 | 37.11 |
| Bra010022.1-P | Field mustard | nucleus | 32.78 | 36.84 |
| Bra010021.1-P | Field mustard | nucleus | 32.78 | 36.84 |
| Solyc05g053330.2.1 | Tomato | nucleus | 32.23 | 36.79 |
| Solyc12g099140.1.1 | Tomato | nucleus | 30.3 | 36.67 |
| Zm00001d007191_P001 | Maize | nucleus | 34.99 | 36.6 |
| KRH02414 | Soybean | nucleus | 32.23 | 36.34 |
| CDY24688 | Canola | nucleus | 31.68 | 36.05 |
| CDY05270 | Canola | nucleus | 31.68 | 35.71 |
| Bra029582.1-P | Field mustard | nucleus | 31.68 | 35.71 |
| AT3G06490.1 | Thale cress | nucleus | 31.68 | 35.6 |
| AT5G49620.2 | Thale cress | nucleus | 31.41 | 35.51 |
| PGSC0003DMT400069841 | Potato | nucleus | 31.68 | 35.49 |
| Bra040274.1-P | Field mustard | nucleus | 31.13 | 35.31 |
| CDX99864 | Canola | nucleus | 31.13 | 35.31 |
| CDY34949 | Canola | nucleus | 31.13 | 35.31 |
| KRH36928 | Soybean | nucleus | 33.06 | 35.29 |
| KRG97314 | Soybean | nucleus | 33.06 | 35.19 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 21.76 | 35.11 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 31.13 | 34.77 |
| KRH50671 | Soybean | nucleus | 31.13 | 34.77 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 30.3 | 33.23 |
| HORVU5Hr1G021750.2 | Barley | nucleus | 20.94 | 32.07 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 30.85 | 31.91 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 25.62 | 31.74 |
| CDY70282 | Canola | nucleus | 25.62 | 31.63 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 20.66 | 28.96 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 21.21 | 28.52 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 19.01 | 26.74 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 19.56 | 26.39 |
| CDX74100 | Canola | nucleus | 23.97 | 25.82 |
| CDY58600 | Canola | nucleus | 16.25 | 18.27 |
| HORVU5Hr1G022710.1 | Barley | cytosol, nucleus | 2.75 | 14.49 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G016380.1 | EnsemblPlantsGene:HORVU2Hr1G016380 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | ncoils:Coil |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF921 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000B47E1F4 | UniProt:A0A287H6G3 | MapMan:15.5.2.1 | : | : |
Description
No Description!
Coordinates
chrchr2H:-:37788457..37866094
Molecular Weight (calculated)
33993.1 Da
IEP (calculated)
5.953
GRAVY (calculated)
-0.382
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXEAAVGE EETLRRGPWT VEEDVLLANY IAANGEGRWN ALARRAGLKR TGKSCRLRWL NYLRPDLRRG
101: GMAAEEQLLI LELHARWGNR WSKIAQHLPG RTDNEIKNYW RTRVQRHARQ LRCDVGSQRF RDLVRCLWIP RLLERIHASA NPGEGDDVLA QATAAALPVV
201: AADGRCSWPA DDVFELGPGA AXXXXXXXXX XXXXXXXXXX XXCGARPLPP PAPMMATAES AHGSVVSSNN CSAAMHEHDT ALWQPPQTQT HGGLIMMGQE
301: EQHHDQQAAG SQQLLGAETW WSDQSSLHAG LYADVGFPEL ELGGETMWGA CADDLWCTDM LGL
101: GMAAEEQLLI LELHARWGNR WSKIAQHLPG RTDNEIKNYW RTRVQRHARQ LRCDVGSQRF RDLVRCLWIP RLLERIHASA NPGEGDDVLA QATAAALPVV
201: AADGRCSWPA DDVFELGPGA AXXXXXXXXX XXXXXXXXXX XXCGARPLPP PAPMMATAES AHGSVVSSNN CSAAMHEHDT ALWQPPQTQT HGGLIMMGQE
301: EQHHDQQAAG SQQLLGAETW WSDQSSLHAG LYADVGFPEL ELGGETMWGA CADDLWCTDM LGL
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.