Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P19990_001 | Banana | nucleus | 37.45 | 71.09 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 45.27 | 60.44 |
| Solyc12g099130.1.1 | Tomato | nucleus | 49.79 | 51.49 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 37.04 | 51.43 |
| PGSC0003DMT400011750 | Potato | nucleus | 48.15 | 50.87 |
| PGSC0003DMT400011745 | Potato | nucleus | 48.97 | 50.85 |
| Solyc12g099120.1.1 | Tomato | nucleus | 49.79 | 48.99 |
| GSMUA_Achr11P... | Banana | nucleus | 51.03 | 47.33 |
| GSMUA_Achr11P... | Banana | nucleus | 49.79 | 45.83 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 47.33 | 44.92 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 47.74 | 44.62 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 48.97 | 44.07 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 55.14 | 43.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.62 | 43.77 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 47.74 | 43.12 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.33 | 43.07 |
| AT2G47190.1 | Thale cress | nucleus | 47.33 | 42.12 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 48.15 | 42.09 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 47.74 | 41.73 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 47.33 | 41.37 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 47.33 | 40.78 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 53.09 | 40.57 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 53.09 | 40.44 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 53.09 | 40.44 |
| AT3G01530.1 | Thale cress | nucleus | 34.16 | 40.29 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 48.15 | 39.93 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 47.33 | 39.79 |
| TraesCSU01G069000.1 | Wheat | nucleus | 47.33 | 39.66 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.86 | 39.64 |
| AT3G06490.1 | Thale cress | nucleus | 52.67 | 39.63 |
| TraesCS4D01G142900.1 | Wheat | nucleus | 47.74 | 39.59 |
| AT3G27810.1 | Thale cress | nucleus | 36.63 | 39.38 |
| AT5G49620.2 | Thale cress | nucleus | 51.85 | 39.25 |
| AT5G40350.1 | Thale cress | nucleus | 34.57 | 39.25 |
| KXG39500 | Sorghum | nucleus | 52.67 | 38.1 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 45.68 | 37.88 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 42.39 | 37.87 |
| Zm00001d028930_P001 | Maize | nucleus | 51.85 | 37.5 |
| GSMUA_Achr11P... | Banana | nucleus | 52.67 | 37.21 |
| AT1G68320.1 | Thale cress | nucleus | 43.62 | 37.06 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 46.5 | 36.81 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 48.56 | 36.53 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 48.56 | 36.42 |
| TraesCS3D01G014800.1 | Wheat | nucleus | 41.56 | 36.33 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 48.56 | 36.31 |
| EES00624 | Sorghum | nucleus | 45.68 | 36.27 |
| Zm00001d047579_P001 | Maize | nucleus | 51.85 | 36.1 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 45.68 | 36.04 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 48.15 | 35.89 |
| Zm00001d040594_P001 | Maize | nucleus | 44.44 | 35.64 |
| KXG36991 | Sorghum | nucleus | 49.79 | 35.38 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 41.15 | 34.84 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 52.67 | 34.69 |
| Zm00001d007191_P001 | Maize | nucleus | 48.56 | 34.01 |
| Zm00001d009066_P001 | Maize | nucleus | 44.03 | 33.65 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 44.86 | 33.44 |
| Zm00001d048647_P001 | Maize | nucleus | 48.15 | 33.24 |
| EES17207 | Sorghum | nucleus | 45.68 | 32.94 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 44.86 | 32.93 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 44.44 | 32.93 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 44.86 | 32.83 |
| Zm00001d030644_P001 | Maize | nucleus | 47.33 | 32.76 |
| AT1G25340.3 | Thale cress | nucleus | 40.74 | 32.14 |
| Zm00001d024726_P001 | Maize | nucleus | 46.91 | 32.11 |
| EES10257 | Sorghum | nucleus | 48.15 | 32.05 |
| AT3G53200.1 | Thale cress | nucleus | 31.28 | 31.93 |
| AT4G13480.1 | Thale cress | nucleus | 34.16 | 31.8 |
| Zm00001d010933_P001 | Maize | nucleus | 47.74 | 31.61 |
| AT5G59780.3 | Thale cress | nucleus | 30.45 | 31.49 |
| AT3G24310.1 | Thale cress | nucleus | 33.74 | 30.48 |
| AT3G46130.1 | Thale cress | nucleus | 31.28 | 29.46 |
| KXG21220 | Sorghum | nucleus | 48.15 | 28.82 |
| Zm00001d024725_P001 | Maize | nucleus | 47.74 | 28.57 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 42.39 | 28.37 |
| AT3G30210.1 | Thale cress | nucleus | 30.45 | 26.81 |
| KXG21221 | Sorghum | nucleus | 47.33 | 24.11 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:841218 | UniProt:A0A178WKB2 | ProteinID:AEE32236.1 | EMBL:AK229083 |
| ArrayExpress:AT1G48000 | EnsemblPlantsGene:AT1G48000 | RefSeq:AT1G48000 | TAIR:AT1G48000 | RefSeq:AT1G48000-TAIR-G | EnsemblPlants:AT1G48000.1 |
| TAIR:AT1G48000.1 | EMBL:AY008377 | EMBL:AY519562 | Unigene:At.16915 | ncoils:Coil | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0006357 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 |
| GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009751 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | GO:GO:0046686 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | Symbol:MYB112 |
| InterPro:Myb_dom | RefSeq:NP_564519.1 | ProteinID:OAP18778.1 | PFAM:PF00249 | PO:PO:0000293 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009047 | PO:PO:0025281 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF743 | UniProt:Q94CJ3 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000009EBBB | SEG:seg | : |
Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
Coordinates
chr1:-:17704132..17706460
Molecular Weight (calculated)
28293.4 Da
IEP (calculated)
8.888
GRAVY (calculated)
-0.710
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.