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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G078600.1 Wheat nucleus 75.54 65.02
CDX85422 Canola nucleus 37.41 56.83
CDX86220 Canola nucleus 37.41 53.89
PGSC0003DMT400011750 Potato nucleus 38.13 46.09
PGSC0003DMT400011745 Potato nucleus 38.13 45.3
Solyc12g099130.1.1 Tomato nucleus 37.77 44.68
Solyc12g099120.1.1 Tomato nucleus 39.21 44.13
AT1G48000.1 Thale cress nucleus 36.33 41.56
VIT_05s0077g00500.t01 Wine grape nucleus 45.32 41.18
Solyc01g057910.2.1 Tomato nucleus 42.45 41.12
PGSC0003DMT400022600 Potato nucleus 42.09 39.39
TraesCS3D01G413700.1 Wheat nucleus 41.37 39.25
Bra001202.1-P Field mustard nucleus 42.09 38.49
TraesCS1D01G415000.1 Wheat nucleus 31.3 38.16
TraesCS5D01G099100.1 Wheat nucleus 38.13 38.13
TraesCS3D01G223700.1 Wheat nucleus 29.14 37.85
TraesCS4D01G142900.1 Wheat nucleus 39.21 37.2
Bra020624.1-P Field mustard nucleus 42.45 37.11
CDY05611 Canola nucleus 42.45 37.11
CDY33891 Canola nucleus 42.45 37.11
PGSC0003DMT400011748 Potato nucleus 39.21 36.95
CDY34949 Canola nucleus 42.45 36.88
CDX99864 Canola nucleus 42.45 36.88
AT5G49620.2 Thale cress nucleus 42.45 36.76
TraesCS4D01G181100.1 Wheat nucleus 42.09 36.68
CDY24688 Canola nucleus 42.09 36.68
Solyc12g099140.1.1 Tomato nucleus 39.57 36.67
Bra040274.1-P Field mustard nucleus 42.09 36.56
Bra029582.1-P Field mustard nucleus 42.09 36.34
CDY05270 Canola nucleus 42.09 36.34
KRH02414 Soybean nucleus 41.73 36.02
AT3G06490.1 Thale cress nucleus 41.73 35.91
Bra010021.1-P Field mustard nucleus 41.37 35.6
Bra010022.1-P Field mustard nucleus 41.37 35.6
Solyc05g053330.2.1 Tomato nucleus 40.65 35.53
KRH50671 Soybean nucleus 41.01 35.08
PGSC0003DMT400069841 Potato nucleus 39.93 34.26
KRH36928 Soybean nucleus 40.65 33.24
KRG97314 Soybean nucleus 40.65 33.14
GSMUA_Achr11P... Banana nucleus 39.57 31.98
CDY70282 Canola nucleus 33.45 31.63
TraesCS2D01G096000.1 Wheat nucleus 36.69 31.1
TraesCS3D01G036200.1 Wheat nucleus 36.33 29.36
TraesCS5D01G095600.1 Wheat nucleus 24.1 28.27
TraesCS2D01G361600.1 Wheat nucleus 25.18 27.24
TraesCS4D01G339100.1 Wheat nucleus 24.1 27.13
TraesCS1D01G043300.1 Wheat nucleus 24.46 26.77
CDX74100 Canola nucleus 31.65 26.11
TraesCS6D01G207300.1 Wheat nucleus 25.18 25.45
TraesCS4D01G142300.1 Wheat nucleus 21.58 25.21
TraesCS3D01G540600.1 Wheat nucleus 23.02 25.0
CDY58600 Canola nucleus 21.22 18.27
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.2.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152InterPro:Homeobox-like_sfInterPro:IPR017877InterPro:IPR017930
InterPro:Myb-like_domInterPro:Myb_domPFAM:PF00249InterPro:PG/BPGM_mutase_ASScanProsite:PS00175PFscan:PS50090
PFscan:PS51294PANTHER:PTHR10641PANTHER:PTHR10641:SF921InterPro:SANT/MybSMART:SM00717SUPFAM:SSF46689
EnsemblPlantsGene:TraesCS3D01G014800EnsemblPlants:TraesCS3D01G014800.1TIGR:cd00167SEG:seg::
Description
No Description!
Coordinates
chr3D:+:5147067..5148084
Molecular Weight (calculated)
30651.9 Da
IEP (calculated)
6.901
GRAVY (calculated)
-0.403
Length
278 amino acids
Sequence
(BLAST)
001: MDTGLAMNVL PMSPAGSSAV TTGDLRRGAW TAEEDLLLVD YISRHGEGRW NSLARCAGLR RTGKSCRLRW LNNLRPDVRR GHITPEEQLL ILDLHSRWGN
101: RWSKIIKNYW RTRVQKHARQ LGCDVNSDRF RQVVRLVWMP RLLERIQAES SSSAAAASEY VALPVAGESQ SYHCFNHASS ECWTAVVAMS PDTPSMPRSS
201: LSSTEASHGG HFPEWGSAAA TANIEGSMMH SCSGEGGAVG GDHHVFPGDK LNESWSELLA ASDVPGFEFG NFEDSLWA
Best Arabidopsis Sequence Match ( AT1G48000.1 )
(BLAST)
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.