Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G512700.1 | Wheat | nucleus | 95.14 | 94.76 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 94.33 | 94.72 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 89.47 | 82.16 |
| Zm00001d048383_P001 | Maize | nucleus | 68.83 | 73.28 |
| Os03t0142600-00 | Rice | nucleus | 72.47 | 72.47 |
| EER92876 | Sorghum | nucleus | 73.68 | 71.94 |
| Zm00001d027623_P001 | Maize | nucleus | 70.04 | 69.48 |
| KRH62917 | Soybean | nucleus | 27.53 | 65.38 |
| KRH55348 | Soybean | nucleus | 31.98 | 63.71 |
| KRH11843 | Soybean | nucleus | 31.58 | 62.9 |
| KRH33348 | Soybean | nucleus | 25.51 | 61.76 |
| KRH75688 | Soybean | nucleus | 25.91 | 59.26 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 40.08 | 48.53 |
| GSMUA_Achr11P... | Banana | nucleus | 40.49 | 46.95 |
| GSMUA_Achr11P... | Banana | nucleus | 43.32 | 46.52 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 41.7 | 44.59 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 46.15 | 44.53 |
| KRH04452 | Soybean | nucleus | 47.37 | 44.15 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 43.32 | 44.03 |
| KRG90311 | Soybean | nucleus | 45.75 | 43.46 |
| Solyc09g090790.2.1 | Tomato | nucleus | 44.13 | 43.43 |
| PGSC0003DMT400003796 | Potato | nucleus | 44.13 | 43.08 |
| PGSC0003DMT400069955 | Potato | nucleus | 39.68 | 42.79 |
| Solyc05g053150.1.1 | Tomato | nucleus | 38.87 | 41.92 |
| KRH34553 | Soybean | nucleus | 44.13 | 40.98 |
| KRG92245 | Soybean | nucleus | 41.7 | 40.55 |
| CDX77436 | Canola | nucleus | 42.51 | 40.38 |
| CDY61190 | Canola | nucleus | 41.7 | 39.46 |
| AT3G24310.1 | Thale cress | nucleus | 42.91 | 39.41 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 40.89 | 39.3 |
| CDY49231 | Canola | nucleus | 42.51 | 39.18 |
| AT4G13480.1 | Thale cress | nucleus | 41.3 | 39.08 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 38.87 | 38.87 |
| Bra015029.1-P | Field mustard | nucleus | 42.51 | 38.75 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 42.91 | 38.55 |
| Bra001941.1-P | Field mustard | nucleus | 42.11 | 37.96 |
| CDX93006 | Canola | nucleus | 42.11 | 37.96 |
| CDX94829 | Canola | nucleus | 41.7 | 37.73 |
| Bra028369.1-P | Field mustard | nucleus | 41.7 | 37.59 |
| CDY64694 | Canola | nucleus | 41.7 | 37.59 |
| Bra020744.1-P | Field mustard | nucleus | 38.46 | 36.97 |
| CDY45895 | Canola | nucleus | 38.46 | 36.97 |
| KRH33568 | Soybean | nucleus | 47.77 | 36.88 |
| PGSC0003DMT400003479 | Potato | nucleus | 34.41 | 35.71 |
| Solyc02g089190.1.1 | Tomato | nucleus | 34.41 | 35.56 |
| CDX85285 | Canola | nucleus | 38.87 | 35.56 |
| Bra025410.1-P | Field mustard | nucleus | 38.46 | 35.45 |
| CDX86354 | Canola | nucleus | 38.46 | 35.45 |
| KRH01379 | Soybean | nucleus | 36.44 | 34.88 |
| KRH01378 | Soybean | nucleus | 38.87 | 34.41 |
| CDY00083 | Canola | nucleus | 37.25 | 34.07 |
| AT3G30210.1 | Thale cress | nucleus | 38.06 | 34.06 |
| KRH45095 | Soybean | nucleus | 37.65 | 33.82 |
| CDY19978 | Canola | nucleus | 36.44 | 33.71 |
| Bra036202.1-P | Field mustard | nucleus | 36.44 | 33.71 |
| TraesCS1D01G043300.1 | Wheat | nucleus | 33.2 | 32.28 |
| TraesCS5D01G095600.1 | Wheat | nucleus | 30.77 | 32.07 |
| TraesCS1D01G415000.1 | Wheat | nucleus | 29.15 | 31.58 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 27.13 | 31.31 |
| TraesCS4D01G142300.1 | Wheat | nucleus | 29.55 | 30.67 |
| TraesCS3D01G540600.1 | Wheat | nucleus | 29.55 | 28.52 |
| CDY35782 | Canola | nucleus | 22.27 | 26.83 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 29.55 | 26.26 |
| TraesCS4D01G142900.1 | Wheat | nucleus | 30.77 | 25.94 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 29.96 | 25.26 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 32.79 | 25.08 |
| TraesCS3D01G014800.1 | Wheat | nucleus | 27.13 | 24.1 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 30.36 | 23.51 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 32.39 | 23.26 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 28.74 | 21.65 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G339100.1 | EnsemblPlantsGene:TraesCS4D01G339100 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | ncoils:Coil |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF539 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : |
Description
No Description!
Coordinates
chr4D:+:497126030..497126958
Molecular Weight (calculated)
28293.6 Da
IEP (calculated)
6.623
GRAVY (calculated)
-0.728
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMDAMSSAV LQGAWRKGPW TALEDRLLTE YVQQQGEGSW NSVAKLTGLR RSGKSCRLRW VNYLRPDLKR GKITADEETV ILQLHAMLGN RWSAIARCLP
101: GRTDNEIKNY WRTHFKKARP SRRARAQLLH QYQLQQQQQH RQYLHALHLL QQQQQEMQMQ LQMEQQTHQP QVMMMQQQSP PEEDQAVITT VGNMNSMEAA
201: ECYCPCPAAS AVLDLPLPAD DEDALWDSLW RLVDGEDGSS GGDSGEY
101: GRTDNEIKNY WRTHFKKARP SRRARAQLLH QYQLQQQQQH RQYLHALHLL QQQQQEMQMQ LQMEQQTHQP QVMMMQQQSP PEEDQAVITT VGNMNSMEAA
201: ECYCPCPAAS AVLDLPLPAD DEDALWDSLW RLVDGEDGSS GGDSGEY
001: METTMKKKGR VKATITSQKE EEGTVRKGPW TMEEDFILFN YILNHGEGLW NSVAKASGLK RTGKSCRLRW LNYLRPDVRR GNITEEEQLL IIQLHAKLGN
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
Arabidopsis Description
MYB57Transcription factor MYB57 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.