Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62917 | Soybean | nucleus | 30.86 | 72.12 |
| KRH33348 | Soybean | nucleus | 30.04 | 71.57 |
| KRH55348 | Soybean | nucleus | 35.8 | 70.16 |
| KRH11843 | Soybean | nucleus | 35.39 | 69.35 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 58.02 | 69.12 |
| KRH75688 | Soybean | nucleus | 29.22 | 65.74 |
| GSMUA_Achr11P... | Banana | nucleus | 53.91 | 61.5 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 55.14 | 58.01 |
| GSMUA_Achr11P... | Banana | nucleus | 54.32 | 57.39 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 29.22 | 57.26 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 30.04 | 57.03 |
| Os02t0618400-02 | Rice | nucleus | 60.49 | 50.87 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 56.38 | 50.74 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 56.79 | 50.37 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 56.38 | 50.0 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 56.38 | 49.82 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 46.09 | 49.78 |
| Zm00001d017243_P001 | Maize | nucleus | 56.79 | 49.11 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 52.26 | 49.03 |
| PGSC0003DMT400069955 | Potato | nucleus | 46.09 | 48.91 |
| EES07157 | Sorghum | nucleus | 57.61 | 48.61 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 51.85 | 48.46 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 51.44 | 48.45 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 51.03 | 48.25 |
| KRG92245 | Soybean | nucleus | 49.79 | 47.64 |
| Zm00001d048383_P001 | Maize | nucleus | 44.86 | 46.98 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 49.38 | 46.88 |
| Solyc05g053150.1.1 | Tomato | nucleus | 44.03 | 46.72 |
| KRH34553 | Soybean | nucleus | 50.21 | 45.86 |
| PGSC0003DMT400003796 | Potato | nucleus | 47.33 | 45.45 |
| Os03t0142600-00 | Rice | nucleus | 45.68 | 44.94 |
| Solyc09g090790.2.1 | Tomato | nucleus | 46.09 | 44.62 |
| Zm00001d025823_P001 | Maize | nucleus | 51.03 | 44.6 |
| KXG26684 | Sorghum | nucleus | 51.44 | 44.33 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 44.86 | 44.31 |
| KRH04452 | Soybean | nucleus | 48.15 | 44.15 |
| CDY61190 | Canola | nucleus | 47.33 | 44.06 |
| CDX77436 | Canola | nucleus | 46.91 | 43.85 |
| KRG90311 | Soybean | nucleus | 46.91 | 43.85 |
| PGSC0003DMT400003479 | Potato | nucleus | 42.8 | 43.7 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 44.44 | 43.55 |
| Os04t0508500-01 | Rice | nucleus | 50.21 | 43.42 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 44.03 | 43.32 |
| Solyc02g089190.1.1 | Tomato | nucleus | 42.39 | 43.1 |
| EER92876 | Sorghum | nucleus | 44.86 | 43.08 |
| AT3G24310.1 | Thale cress | nucleus | 47.33 | 42.75 |
| Zm00001d027623_P001 | Maize | nucleus | 43.62 | 42.57 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 31.69 | 42.31 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 42.8 | 42.11 |
| Bra015029.1-P | Field mustard | nucleus | 46.91 | 42.07 |
| Bra001941.1-P | Field mustard | nucleus | 47.33 | 41.97 |
| Bra028369.1-P | Field mustard | nucleus | 47.33 | 41.97 |
| CDX93006 | Canola | nucleus | 47.33 | 41.97 |
| CDY49231 | Canola | nucleus | 46.09 | 41.79 |
| AT4G13480.1 | Thale cress | nucleus | 44.86 | 41.76 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 30.04 | 41.71 |
| CDY64694 | Canola | nucleus | 46.91 | 41.61 |
| CDX94829 | Canola | nucleus | 46.5 | 41.39 |
| GSMUA_Achr10P... | Banana | nucleus | 29.63 | 41.14 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 45.27 | 40.89 |
| Zm00001d051117_P001 | Maize | nucleus | 46.5 | 40.5 |
| Bra025410.1-P | Field mustard | nucleus | 41.98 | 38.06 |
| CDX86354 | Canola | nucleus | 41.98 | 38.06 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 30.45 | 37.95 |
| CDX85285 | Canola | nucleus | 41.98 | 37.78 |
| Bra020744.1-P | Field mustard | nucleus | 39.51 | 37.35 |
| CDY45895 | Canola | nucleus | 39.51 | 37.35 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 30.04 | 37.24 |
| KRH33568 | Soybean | nucleus | 48.56 | 36.88 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 31.69 | 36.84 |
| Bra036202.1-P | Field mustard | nucleus | 40.33 | 36.7 |
| CDY19978 | Canola | nucleus | 40.33 | 36.7 |
| CDY00083 | Canola | nucleus | 40.74 | 36.67 |
| KRH01379 | Soybean | nucleus | 38.68 | 36.43 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 30.04 | 35.61 |
| AT3G30210.1 | Thale cress | nucleus | 40.33 | 35.51 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 28.4 | 35.38 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 30.86 | 35.05 |
| KRH45095 | Soybean | nucleus | 39.51 | 34.91 |
| GSMUA_Achr10P... | Banana | nucleus | 30.45 | 34.91 |
| KRH01378 | Soybean | nucleus | 39.92 | 34.77 |
| GSMUA_Achr10P... | Banana | nucleus | 31.69 | 34.07 |
| GSMUA_Achr11P... | Banana | nucleus | 33.74 | 34.02 |
| GSMUA_Achr10P... | Banana | nucleus | 31.69 | 32.63 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 31.28 | 32.07 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 33.33 | 31.64 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 30.45 | 31.36 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.16 | 31.09 |
| GSMUA_Achr11P... | Banana | nucleus | 33.74 | 31.06 |
| GSMUA_Achr11P... | Banana | nucleus | 33.33 | 30.92 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 32.92 | 30.77 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 30.45 | 30.71 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 30.86 | 30.12 |
| CDY35782 | Canola | nucleus | 25.1 | 29.76 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 32.92 | 29.63 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 29.63 | 29.39 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 32.51 | 29.04 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 32.1 | 29.0 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 34.16 | 28.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.33 | 28.83 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.1 | 28.36 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 33.33 | 27.74 |
| GSMUA_Achr11P... | Banana | nucleus | 34.57 | 26.67 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 32.51 | 26.07 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 32.51 | 25.65 |
| GSMUA_Achr11P... | Banana | nucleus | 30.45 | 21.51 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 30.04 | 5.81 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| EnsemblPlantsGene:GSMUA_Achr1G03450_001 | EnsemblPlants:GSMUA_Achr1P03450_001 | EnsemblPlants:GSMUA_Achr1T03450_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0RWQ3 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF574 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002958F4C | SEG:seg | : | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G03450_001]
Coordinates
chr1:-:2820599..2821475
Molecular Weight (calculated)
27971.1 Da
IEP (calculated)
8.326
GRAVY (calculated)
-0.796
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MERYFEAVAV ADGWRKGPWT AQEDKLLIEH VNLHGEGRWN SVSELSGLRR SGKSCRLRWV NYLRPDLKKG KITPEEENVI LELHALWGNR WSTIARSLPG
101: RTDNEIKNYW RTHFKKSTPS KNIEKARARF LRRRQQQQQH QAVPPPPPPP QQQQDDMRTI MNQVAQITLA QDMQQEMAYM YPLPYALQQQ GGAAHGCVVD
201: GPAAAAAEDD SWGSLWNLDD VQHDVERVCR GCLQVQDQAL SFY
101: RTDNEIKNYW RTHFKKSTPS KNIEKARARF LRRRQQQQQH QAVPPPPPPP QQQQDDMRTI MNQVAQITLA QDMQQEMAYM YPLPYALQQQ GGAAHGCVVD
201: GPAAAAAEDD SWGSLWNLDD VQHDVERVCR GCLQVQDQAL SFY
001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
Arabidopsis Description
MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.