Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017243_P001 | Maize | nucleus | 86.81 | 88.97 |
| KRH62917 | Soybean | nucleus | 27.78 | 76.92 |
| Zm00001d051117_P001 | Maize | nucleus | 73.96 | 76.34 |
| KRH55348 | Soybean | nucleus | 32.64 | 75.81 |
| KRH33348 | Soybean | nucleus | 26.74 | 75.49 |
| KRH11843 | Soybean | nucleus | 32.29 | 75.0 |
| KRH75688 | Soybean | nucleus | 26.74 | 71.3 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 67.36 | 70.8 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 66.32 | 70.74 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 67.01 | 70.44 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 66.67 | 69.82 |
| Os02t0618400-02 | Rice | nucleus | 69.44 | 69.2 |
| GSMUA_Achr11P... | Banana | nucleus | 48.61 | 65.73 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 49.31 | 61.47 |
| GSMUA_Achr11P... | Banana | nucleus | 46.88 | 58.7 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 48.61 | 57.61 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 40.28 | 56.86 |
| KXG26684 | Sorghum | nucleus | 55.56 | 56.74 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 46.88 | 52.73 |
| PGSC0003DMT400069955 | Potato | nucleus | 41.32 | 51.97 |
| KRG90311 | Soybean | nucleus | 45.83 | 50.77 |
| Solyc05g053150.1.1 | Tomato | nucleus | 39.93 | 50.22 |
| KRH04452 | Soybean | nucleus | 45.83 | 49.81 |
| Solyc09g090790.2.1 | Tomato | nucleus | 43.4 | 49.8 |
| KRG92245 | Soybean | nucleus | 43.75 | 49.61 |
| PGSC0003DMT400003796 | Potato | nucleus | 42.71 | 48.62 |
| KRH34553 | Soybean | nucleus | 44.1 | 47.74 |
| CDX77436 | Canola | nucleus | 42.71 | 47.31 |
| CDY61190 | Canola | nucleus | 42.71 | 47.13 |
| CDY49231 | Canola | nucleus | 42.71 | 45.9 |
| EER92876 | Sorghum | nucleus | 39.93 | 45.45 |
| Bra015029.1-P | Field mustard | nucleus | 42.71 | 45.39 |
| AT3G24310.1 | Thale cress | nucleus | 42.36 | 45.35 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 38.54 | 44.94 |
| CDX93006 | Canola | nucleus | 42.71 | 44.89 |
| Bra001941.1-P | Field mustard | nucleus | 42.71 | 44.89 |
| Bra028369.1-P | Field mustard | nucleus | 42.71 | 44.89 |
| CDX94829 | Canola | nucleus | 42.36 | 44.69 |
| PGSC0003DMT400003479 | Potato | nucleus | 36.81 | 44.54 |
| Solyc02g089190.1.1 | Tomato | nucleus | 36.81 | 44.35 |
| CDY64694 | Canola | nucleus | 42.01 | 44.16 |
| CDX85285 | Canola | nucleus | 40.97 | 43.7 |
| CDX86354 | Canola | nucleus | 40.62 | 43.66 |
| Bra025410.1-P | Field mustard | nucleus | 40.62 | 43.66 |
| AT4G13480.1 | Thale cress | nucleus | 38.89 | 42.91 |
| Bra020744.1-P | Field mustard | nucleus | 37.15 | 41.63 |
| CDY45895 | Canola | nucleus | 37.15 | 41.63 |
| KRH33568 | Soybean | nucleus | 45.83 | 41.25 |
| Bra036202.1-P | Field mustard | nucleus | 38.19 | 41.2 |
| CDY19978 | Canola | nucleus | 38.19 | 41.2 |
| CDY00083 | Canola | nucleus | 38.54 | 41.11 |
| KRH01379 | Soybean | nucleus | 35.76 | 39.92 |
| AT3G30210.1 | Thale cress | nucleus | 37.5 | 39.13 |
| KRH01378 | Soybean | nucleus | 35.42 | 36.56 |
| KRH45095 | Soybean | nucleus | 34.72 | 36.36 |
| KXG23736 | Sorghum | nucleus | 29.17 | 35.0 |
| KXG29192 | Sorghum | nucleus | 26.74 | 33.77 |
| CDY35782 | Canola | nucleus | 23.61 | 33.17 |
| KXG29190 | Sorghum | nucleus | 21.53 | 29.25 |
| EES01143 | Sorghum | nucleus | 28.47 | 27.99 |
| KXG39500 | Sorghum | nucleus | 32.29 | 27.68 |
| EES00624 | Sorghum | nucleus | 29.17 | 27.45 |
| OQU77249 | Sorghum | nucleus | 29.17 | 27.27 |
| KXG36991 | Sorghum | nucleus | 31.25 | 26.32 |
| EES17592 | Sorghum | nucleus | 29.51 | 25.45 |
| EES10257 | Sorghum | nucleus | 30.9 | 24.38 |
| EES17207 | Sorghum | nucleus | 28.12 | 24.04 |
| KXG21220 | Sorghum | nucleus | 31.6 | 22.41 |
| EES00381 | Sorghum | nucleus | 29.17 | 21.59 |
| KXG21221 | Sorghum | nucleus | 30.56 | 18.45 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:8071730 | UniProt:C5XXQ5 | ncoils:Coil | EnsemblPlants:EES07157 |
| ProteinID:EES07157 | ProteinID:EES07157.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF574 | InterPro:SANT/Myb |
| SMART:SM00717 | EnsemblPlantsGene:SORBI_3004G216900 | SUPFAM:SSF46689 | UniParc:UPI0001A85EDB | RefSeq:XP_002454181.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:-:56654358..56656505
Molecular Weight (calculated)
32542.7 Da
IEP (calculated)
5.621
GRAVY (calculated)
-0.903
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGQFGWGRE EGGWRKGPWT AQEDKLLVEY VRQHGEGRWN SVAKLTGLKR SGKSCRLRWV NYLRPDLKRG KITPQEESVI LELHALWGNR WSTIARSLPG
101: RTDNEIKNYW RTHFKKGKPS KNIERARARF LKQRREMQSQ LLLQGQDHHQ QKEKQPDHHH DDDDDDDKDT SRDREAAAPA AVSLAQQNEE DLRMLQQDMD
201: DLLFQFCPMA SCTSSSCLLP GGGSCASVVS ASASEEGSSG DHQLDGGATW GWGSLWNLDD VVDDVDGGAC GWDDSSFPLL QDQGLAFY
101: RTDNEIKNYW RTHFKKGKPS KNIERARARF LKQRREMQSQ LLLQGQDHHQ QKEKQPDHHH DDDDDDDKDT SRDREAAAPA AVSLAQQNEE DLRMLQQDMD
201: DLLFQFCPMA SCTSSSCLLP GGGSCASVVS ASASEEGSSG DHQLDGGATW GWGSLWNLDD VVDDVDGGAC GWDDSSFPLL QDQGLAFY
001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
Arabidopsis Description
MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.