Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g053150.1.1 | Tomato | nucleus | 88.65 | 88.65 |
| KRH62917 | Soybean | nucleus | 37.55 | 82.69 |
| KRH33348 | Soybean | nucleus | 36.24 | 81.37 |
| KRH55348 | Soybean | nucleus | 43.67 | 80.65 |
| KRH11843 | Soybean | nucleus | 43.23 | 79.84 |
| KRH75688 | Soybean | nucleus | 35.81 | 75.93 |
| PGSC0003DMT400003796 | Potato | nucleus | 67.25 | 60.87 |
| KRG92245 | Soybean | nucleus | 64.19 | 57.87 |
| CDY61190 | Canola | nucleus | 62.01 | 54.41 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 60.7 | 54.3 |
| KRH34553 | Soybean | nucleus | 62.88 | 54.14 |
| KRH04452 | Soybean | nucleus | 61.57 | 53.21 |
| KRG90311 | Soybean | nucleus | 60.26 | 53.08 |
| AT3G24310.1 | Thale cress | nucleus | 62.01 | 52.79 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 46.72 | 52.45 |
| CDX77436 | Canola | nucleus | 59.39 | 52.31 |
| CDY49231 | Canola | nucleus | 61.14 | 52.24 |
| CDX94829 | Canola | nucleus | 62.01 | 52.01 |
| Bra001941.1-P | Field mustard | nucleus | 62.01 | 51.82 |
| Bra028369.1-P | Field mustard | nucleus | 62.01 | 51.82 |
| CDX93006 | Canola | nucleus | 62.01 | 51.82 |
| Bra015029.1-P | Field mustard | nucleus | 61.14 | 51.66 |
| CDY64694 | Canola | nucleus | 61.57 | 51.46 |
| AT4G13480.1 | Thale cress | nucleus | 58.08 | 50.96 |
| GSMUA_Achr11P... | Banana | nucleus | 46.72 | 50.23 |
| PGSC0003DMT400072687 | Potato | nucleus | 29.26 | 49.26 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 47.16 | 46.75 |
| GSMUA_Achr11P... | Banana | nucleus | 46.72 | 46.52 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 48.91 | 46.09 |
| KRH33568 | Soybean | nucleus | 62.01 | 44.38 |
| Zm00001d048383_P001 | Maize | nucleus | 42.79 | 42.24 |
| PGSC0003DMT400003479 | Potato | nucleus | 43.67 | 42.02 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 49.34 | 41.85 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 41.05 | 41.78 |
| Zm00001d017243_P001 | Maize | nucleus | 51.09 | 41.64 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 49.78 | 41.61 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 49.78 | 41.61 |
| EES07157 | Sorghum | nucleus | 51.97 | 41.32 |
| Os03t0142600-00 | Rice | nucleus | 44.1 | 40.89 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 45.85 | 40.86 |
| Os02t0618400-02 | Rice | nucleus | 51.53 | 40.83 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 46.29 | 40.77 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 48.91 | 40.73 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 45.85 | 40.7 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 45.41 | 40.15 |
| Zm00001d025823_P001 | Maize | nucleus | 48.47 | 39.93 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 42.79 | 39.84 |
| Zm00001d027623_P001 | Maize | nucleus | 43.23 | 39.76 |
| KXG26684 | Sorghum | nucleus | 48.91 | 39.72 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 42.79 | 39.68 |
| EER92876 | Sorghum | nucleus | 43.67 | 39.53 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 42.36 | 39.11 |
| Os04t0508500-01 | Rice | nucleus | 47.16 | 38.43 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 44.98 | 38.29 |
| PGSC0003DMT400001278 | Potato | nucleus | 34.5 | 38.16 |
| PGSC0003DMT400040149 | Potato | nucleus | 35.81 | 37.61 |
| PGSC0003DMT400011745 | Potato | nucleus | 35.37 | 34.62 |
| Zm00001d051117_P001 | Maize | nucleus | 41.48 | 34.05 |
| PGSC0003DMT400011750 | Potato | nucleus | 34.06 | 33.91 |
| PGSC0003DMT400037716 | Potato | nucleus | 38.43 | 32.23 |
| PGSC0003DMT400022600 | Potato | nucleus | 39.3 | 30.3 |
| PGSC0003DMT400011748 | Potato | nucleus | 37.55 | 29.15 |
| PGSC0003DMT400014383 | Potato | nucleus | 34.5 | 28.42 |
| PGSC0003DMT400069841 | Potato | nucleus | 37.99 | 26.85 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102587080 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1CLG8 | InterPro:Myb_dom | PFAM:PF00249 |
| EnsemblPlantsGene:PGSC0003DMG400027202 | PGSC:PGSC0003DMG400027202 | EnsemblPlants:PGSC0003DMT400069955 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF574 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002964711 | RefSeq:XP_006355751.1 | SEG:seg |
Description
MYB-like DNA-binding domain protein [Source:PGSC_GENE;Acc:PGSC0003DMG400027202]
Coordinates
chr5:-:48416600..48418300
Molecular Weight (calculated)
27302.4 Da
IEP (calculated)
9.203
GRAVY (calculated)
-0.862
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRWGIIEEE WRKGPWTVEE DKLLIEYVNL HGEGRWNSVA RLAGLKRNGK SCRLRWVNYL RPDLKRGQIT PYEERIILEL HAIWGNRWST IARSLPGRTD
101: NEIKNYWRTN FKKKFKKSST ENSEKTKVHF LKRKQFQQQQ LLNSQIDMKK IMSLFEENEN KVPSHVPKQE DMTILYQNNT FHEQEQGGFF YSMINGYANY
201: VPVPEASSND EDIMWDIGLW NLDDFNVNL
101: NEIKNYWRTN FKKKFKKSST ENSEKTKVHF LKRKQFQQQQ LLNSQIDMKK IMSLFEENEN KVPSHVPKQE DMTILYQNNT FHEQEQGGFF YSMINGYANY
201: VPVPEASSND EDIMWDIGLW NLDDFNVNL
001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
Arabidopsis Description
MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.