Factsheet for Solyc05g053150.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069955	Potato	nucleus	88.65	88.65
KRH62917	Soybean	nucleus	37.55	82.69
KRH33348	Soybean	nucleus	36.24	81.37
KRH55348	Soybean	nucleus	43.23	79.84
KRH11843	Soybean	nucleus	42.79	79.03
KRH75688	Soybean	nucleus	35.37	75.0
Solyc09g090790.2.1	Tomato	nucleus	64.63	58.96
Solyc02g086690.2.1	Tomato	nucleus	24.02	58.51
KRG92245	Soybean	nucleus	63.32	57.09
VIT_05s0049g02260.t01	Wine grape	nucleus	60.7	54.3
KRH34553	Soybean	nucleus	62.45	53.76
CDY61190	Canola	nucleus	60.7	53.26
KRG90311	Soybean	nucleus	58.95	51.92
KRH04452	Soybean	nucleus	59.39	51.32
CDX77436	Canola	nucleus	58.08	51.15
AT3G24310.1	Thale cress	nucleus	59.83	50.93
CDY49231	Canola	nucleus	59.39	50.75
Bra028369.1-P	Field mustard	nucleus	60.7	50.73
CDX94829	Canola	nucleus	60.26	50.55
GSMUA_Achr4P29230_001	Banana	nucleus	44.98	50.49
Solyc09g008390.1.1	Tomato	nucleus	28.82	50.38
Bra015029.1-P	Field mustard	nucleus	59.39	50.18
Bra001941.1-P	Field mustard	nucleus	59.83	50.0
CDX93006	Canola	nucleus	59.83	50.0
CDY64694	Canola	nucleus	59.39	49.63
AT4G13480.1	Thale cress	nucleus	55.9	49.04
GSMUA_Achr11P...	Banana	nucleus	44.98	48.36
GSMUA_Achr11P...	Banana	nucleus	45.41	45.22
GSMUA_Achr8P12710_001	Banana	nucleus	44.98	44.59
GSMUA_Achr1P03450_001	Banana	nucleus	46.72	44.03
KRH33568	Soybean	nucleus	59.83	42.81
Solyc02g089190.1.1	Tomato	nucleus	44.1	42.26
Zm00001d048383_P001	Maize	nucleus	41.92	41.38
HORVU0Hr1G005100.1	Barley	nucleus	40.17	40.89
Zm00001d017243_P001	Maize	nucleus	49.78	40.57
Os03t0142600-00	Rice	nucleus	43.67	40.49
HORVU6Hr1G057670.3	Barley	nucleus	47.6	40.37
TraesCS6A01G227700.1	Wheat	nucleus	48.03	40.15
TraesCS6B01G254200.1	Wheat	nucleus	48.03	40.15
TraesCS2D01G361600.1	Wheat	nucleus	44.98	40.08
TraesCS2A01G363800.1	Wheat	nucleus	45.41	40.0
EES07157	Sorghum	nucleus	50.22	39.93
TraesCS2B01G381800.1	Wheat	nucleus	44.98	39.92
Solyc02g067760.2.1	Tomato	nucleus	33.62	39.49
Os02t0618400-02	Rice	nucleus	49.78	39.45
HORVU2Hr1G087990.1	Barley	nucleus	44.54	39.38
KXG26684	Sorghum	nucleus	48.47	39.36
TraesCS6D01G207300.1	Wheat	nucleus	47.16	39.27
TraesCS4B01G344000.1	Wheat	nucleus	41.92	39.02
Zm00001d027623_P001	Maize	nucleus	42.36	38.96
TraesCS4D01G339100.1	Wheat	nucleus	41.92	38.87
EER92876	Sorghum	nucleus	42.79	38.74
Zm00001d025823_P001	Maize	nucleus	46.72	38.49
TraesCS5A01G512700.1	Wheat	nucleus	41.48	38.31
Solyc11g073120.1.1	Tomato	nucleus	36.24	38.25
Os04t0508500-01	Rice	nucleus	46.29	37.72
HORVU4Hr1G084360.3	Barley	nucleus	44.1	37.55
Solyc10g083900.1.1	Tomato	nucleus	30.57	35.0
Solyc12g099130.1.1	Tomato	nucleus	34.5	33.62
Solyc06g005330.2.1	Tomato	nucleus	34.5	33.47
Zm00001d051117_P001	Maize	nucleus	40.17	32.97
Solyc12g099120.1.1	Tomato	nucleus	34.93	32.39
Solyc05g009230.1.1	Tomato	nucleus	38.43	32.12
Solyc01g057910.2.1	Tomato	nucleus	37.55	29.97
Solyc12g099140.1.1	Tomato	nucleus	36.68	28.0
Solyc03g119370.1.1	Tomato	nucleus	34.06	27.86
Solyc05g053330.2.1	Tomato	nucleus	37.99	27.36

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
UniProt:K4C1Z5	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF574
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	EnsemblPlantsGene:Solyc05g053150.1	EnsemblPlants:Solyc05g053150.1.1	UniParc:UPI00027660F8
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:63280116..63281280

Molecular Weight (calculated)

27332.6 Da

IEP (calculated)

9.492

GRAVY (calculated)

-0.838

Length

229 amino acids

Sequence
(BLAST)

001: MRRWGIIEEE WRKGPWTVEE DKLLIDYVNL HGEGRWNCVA RLAGLKRNGK SCRLRWVNYL RPDLKRGQIT PYEERIILEL HAIWGNRWST IARNLPGRTD
101: NEIKNYWRTH FKKKVKKTST DNSEKTKRIC LLKRHQFQQQ QLSNSQIDLK RMMLLFEENE NKVVSHVPKQ DMTILYHNNT FHEQDQQGGL FGSMINGYAN
201: YVQVPEASSN EDIMWDIGLW NLDDYNVNL

Best Arabidopsis Sequence Match ( AT3G24310.1 )
(BLAST)

001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC

Arabidopsis Description

MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.