Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400072687 | Potato | nucleus | 59.5 | 87.5 |
| Solyc09g008390.1.1 | Tomato | nucleus | 48.5 | 74.05 |
| VIT_08s0007g04830.t01 | Wine grape | nucleus | 40.0 | 65.04 |
| Solyc02g086690.2.1 | Tomato | nucleus | 20.5 | 43.62 |
| KRH19953 | Soybean | nucleus | 49.5 | 43.23 |
| KRH32555 | Soybean | nucleus | 48.5 | 41.81 |
| AT3G53200.1 | Thale cress | nucleus | 44.5 | 37.4 |
| Solyc11g073120.1.1 | Tomato | nucleus | 40.5 | 37.33 |
| Bra028550.1-P | Field mustard | nucleus | 42.0 | 35.0 |
| Bra006977.1-P | Field mustard | nucleus | 42.5 | 34.69 |
| CDX78153 | Canola | nucleus | 42.5 | 34.69 |
| CDX73572 | Canola | nucleus | 42.5 | 34.69 |
| CDY13311 | Canola | nucleus | 41.5 | 34.02 |
| Solyc02g067760.2.1 | Tomato | nucleus | 33.0 | 33.85 |
| CDX67561 | Canola | nucleus | 40.0 | 33.33 |
| Solyc06g005330.2.1 | Tomato | nucleus | 36.5 | 30.93 |
| Solyc05g053150.1.1 | Tomato | nucleus | 35.0 | 30.57 |
| Solyc12g099130.1.1 | Tomato | nucleus | 34.0 | 28.94 |
| Solyc02g089190.1.1 | Tomato | nucleus | 34.0 | 28.45 |
| Solyc12g099120.1.1 | Tomato | nucleus | 33.5 | 27.13 |
| Solyc09g090790.2.1 | Tomato | nucleus | 33.0 | 26.29 |
| Solyc05g009230.1.1 | Tomato | nucleus | 35.5 | 25.91 |
| Solyc03g119370.1.1 | Tomato | nucleus | 35.5 | 25.36 |
| Solyc01g057910.2.1 | Tomato | nucleus | 34.5 | 24.04 |
| Solyc12g099140.1.1 | Tomato | nucleus | 34.0 | 22.67 |
| Solyc05g053330.2.1 | Tomato | nucleus | 36.0 | 22.64 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| UniProt:K4D3H6 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF636 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc10g083900.1 | EnsemblPlants:Solyc10g083900.1.1 | UniParc:UPI000276A0BF |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:63618304..63619293
Molecular Weight (calculated)
23543.5 Da
IEP (calculated)
8.467
GRAVY (calculated)
-0.980
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEEELRRGQ WLEEEDERLS MMVAVFGERR WDALAKTSGL KRSGKSCRLR WLNYLRPNLK HGHITADEER LIIRLQKQFG NKWSKIAKQL PGRTDNEIKN
101: YWRSHLRKKT LIYKQESSES NTSNSEQRSS ILKRDTVLNS SSNSEDNFSE KGDCSSADSF AYSSNEVTLL DWIPSWSYEQ TRMEHHMYFC STNLCSCYPP
101: YWRSHLRKKT LIYKQESSES NTSNSEQRSS ILKRDTVLNS SSNSEDNFSE KGDCSSADSF AYSSNEVTLL DWIPSWSYEQ TRMEHHMYFC STNLCSCYPP
001: MDFKKEETLR RGPWLEEEDE RLVKVISLLG ERRWDSLAIV SGLKRSGKSC RLRWMNYLNP TLKRGPMSQE EERIIFQLHA LWGNKWSKIA RRLPGRTDNE
101: IKNYWRTHYR KKQEAQNYGK LFEWRGNTGE ELLHKYKETE ITRTKTTSQE HGFVEVVSME SGKEANGGVG GRESFGVMKS PYENRISDWI SEISTDQSEA
201: NLSEDHSSNS CSENNINIGT WWFQETRDFE EFSCSLWS
101: IKNYWRTHYR KKQEAQNYGK LFEWRGNTGE ELLHKYKETE ITRTKTTSQE HGFVEVVSME SGKEANGGVG GRESFGVMKS PYENRISDWI SEISTDQSEA
201: NLSEDHSSNS CSENNINIGT WWFQETRDFE EFSCSLWS
Arabidopsis Description
MYB27Transcription factor MYB27 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.