Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400014383 | Potato | nucleus | 92.5 | 93.17 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 35.36 | 79.84 |
| Solyc02g086690.2.1 | Tomato | nucleus | 22.14 | 65.96 |
| GSMUA_Achr10P... | Banana | nucleus | 37.86 | 60.57 |
| CDY58599 | Canola | nucleus | 22.14 | 58.49 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 38.21 | 54.87 |
| Solyc02g067760.2.1 | Tomato | nucleus | 34.64 | 49.74 |
| Solyc05g009230.1.1 | Tomato | nucleus | 47.14 | 48.18 |
| Solyc09g008390.1.1 | Tomato | nucleus | 22.14 | 47.33 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 40.71 | 45.78 |
| CDY69488 | Canola | nucleus | 45.0 | 45.49 |
| Bra004297.1-P | Field mustard | nucleus | 46.07 | 45.42 |
| CDX96033 | Canola | nucleus | 46.07 | 45.42 |
| CDY01906 | Canola | nucleus | 45.71 | 44.91 |
| AT1G68320.1 | Thale cress | nucleus | 45.36 | 44.41 |
| Bra004041.1-P | Field mustard | nucleus | 44.64 | 44.33 |
| CDY69953 | Canola | nucleus | 44.64 | 44.33 |
| Bra012482.1-P | Field mustard | nucleus | 44.64 | 44.01 |
| CDY03859 | Canola | nucleus | 44.64 | 43.55 |
| Solyc12g099130.1.1 | Tomato | nucleus | 36.43 | 43.4 |
| Solyc12g099120.1.1 | Tomato | nucleus | 38.21 | 43.32 |
| CDY42115 | Canola | nucleus | 42.5 | 42.96 |
| Bra033948.1-P | Field mustard | nucleus | 43.57 | 42.81 |
| CDY12705 | Canola | nucleus | 43.57 | 42.81 |
| CDX84981 | Canola | nucleus | 43.93 | 42.71 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 44.29 | 42.47 |
| CDY54094 | Canola | nucleus | 42.86 | 42.11 |
| Bra024760.1-P | Field mustard | nucleus | 38.57 | 40.6 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 43.57 | 40.26 |
| Solyc11g073120.1.1 | Tomato | nucleus | 30.71 | 39.63 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 43.57 | 39.61 |
| Solyc01g057910.2.1 | Tomato | nucleus | 40.36 | 39.37 |
| GSMUA_Achr11P... | Banana | nucleus | 44.29 | 39.37 |
| Solyc12g099140.1.1 | Tomato | nucleus | 41.07 | 38.33 |
| AT1G25340.3 | Thale cress | nucleus | 42.14 | 38.31 |
| Solyc05g053330.2.1 | Tomato | nucleus | 40.71 | 35.85 |
| Solyc10g083900.1.1 | Tomato | nucleus | 25.36 | 35.5 |
| Solyc06g005330.2.1 | Tomato | nucleus | 29.64 | 35.17 |
| Solyc05g053150.1.1 | Tomato | nucleus | 27.86 | 34.06 |
| Zm00001d040019_P001 | Maize | nucleus | 43.57 | 33.7 |
| Zm00001d008528_P001 | Maize | nucleus | 43.57 | 33.7 |
| Os01t0128000-01 | Rice | nucleus | 41.43 | 33.14 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 40.0 | 32.56 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 40.0 | 32.37 |
| Solyc09g090790.2.1 | Tomato | nucleus | 28.93 | 32.27 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 40.0 | 31.91 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 40.0 | 31.91 |
| EES00381 | Sorghum | nucleus | 43.93 | 31.62 |
| Solyc02g089190.1.1 | Tomato | nucleus | 26.07 | 30.54 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| UniProt:K4BM86 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF510 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc03g119370.1 | EnsemblPlants:Solyc03g119370.1.1 | UniParc:UPI00027665C8 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:67999327..68000440
Molecular Weight (calculated)
32087.3 Da
IEP (calculated)
6.403
GRAVY (calculated)
-0.787
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: METEMSFLSK SSSSSSSDDD IELRRGPWTI EEDKLLVHYI TNHGEGRWNM LAKHAGLKRT GKSCRLRWLN YLKPDVKRGN LTPQEQLLIL ELHSKLGNRW
101: SKIAQYLPGR TDNEIKNYWR TRVQKQARNL KIDSNSAAFQ EMIRSLWIPR LLQKIQSSSV SPSIQSSQSS TPPGFSTSSN SSSHSSSIYN SPNNISECPQ
201: IPTREIDDSD LDSFVKAHFP FDNSYDMDNF GQLTTGNFND VMDYDQLSGD HIKMTGDVIA DSFWSNMDEF FYQKTGYEQQ
101: SKIAQYLPGR TDNEIKNYWR TRVQKQARNL KIDSNSAAFQ EMIRSLWIPR LLQKIQSSSV SPSIQSSQSS TPPGFSTSSN SSSHSSSIYN SPNNISECPQ
201: IPTREIDDSD LDSFVKAHFP FDNSYDMDNF GQLTTGNFND VMDYDQLSGD HIKMTGDVIA DSFWSNMDEF FYQKTGYEQQ
001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
Arabidopsis Description
MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.