Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P01370_001 | Banana | nucleus | 29.01 | 84.68 |
| EES00381 | Sorghum | nucleus | 77.9 | 72.49 |
| GSMUA_Achr10P... | Banana | nucleus | 33.7 | 69.71 |
| Zm00001d040019_P001 | Maize | nucleus | 67.96 | 67.96 |
| CDY58599 | Canola | nucleus | 19.61 | 66.98 |
| Os01t0128000-01 | Rice | nucleus | 63.26 | 65.43 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 34.25 | 63.59 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 60.22 | 62.11 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 59.12 | 61.85 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 58.56 | 61.63 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 59.39 | 61.25 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 39.78 | 57.83 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 42.82 | 53.08 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 44.48 | 52.27 |
| GSMUA_Achr11P... | Banana | nucleus | 43.92 | 50.48 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 40.33 | 48.18 |
| PGSC0003DMT400037716 | Potato | nucleus | 35.36 | 46.89 |
| Solyc05g009230.1.1 | Tomato | nucleus | 35.36 | 46.72 |
| Bra004297.1-P | Field mustard | nucleus | 35.08 | 44.72 |
| CDX96033 | Canola | nucleus | 35.08 | 44.72 |
| CDY69488 | Canola | nucleus | 33.98 | 44.4 |
| CDY01906 | Canola | nucleus | 34.81 | 44.21 |
| AT1G68320.1 | Thale cress | nucleus | 34.53 | 43.71 |
| CDY69953 | Canola | nucleus | 33.98 | 43.62 |
| Solyc03g119370.1.1 | Tomato | nucleus | 33.7 | 43.57 |
| PGSC0003DMT400014383 | Potato | nucleus | 33.43 | 43.53 |
| Bra004041.1-P | Field mustard | nucleus | 33.7 | 43.26 |
| CDY12705 | Canola | nucleus | 33.98 | 43.16 |
| Bra033948.1-P | Field mustard | nucleus | 33.98 | 43.16 |
| CDY54094 | Canola | nucleus | 33.7 | 42.81 |
| Bra012482.1-P | Field mustard | nucleus | 33.15 | 42.25 |
| VIT_17s0000g03560.t01 | Wine grape | nucleus | 38.12 | 42.07 |
| CDY42115 | Canola | nucleus | 31.77 | 41.52 |
| CDY03859 | Canola | nucleus | 32.87 | 41.46 |
| KRH41648 | Soybean | nucleus | 35.64 | 41.35 |
| CDX84981 | Canola | nucleus | 32.87 | 41.32 |
| KRH60346 | Soybean | nucleus | 35.91 | 41.01 |
| Bra024760.1-P | Field mustard | nucleus | 29.01 | 39.47 |
| Zm00001d010933_P001 | Maize | nucleus | 38.4 | 37.87 |
| Zm00001d040594_P001 | Maize | nucleus | 31.49 | 37.62 |
| KRH39173 | Soybean | nucleus | 32.04 | 37.42 |
| KRH48497 | Soybean | nucleus | 32.04 | 37.3 |
| Zm00001d047579_P001 | Maize | nucleus | 35.91 | 37.25 |
| Zm00001d007191_P001 | Maize | nucleus | 35.64 | 37.18 |
| Zm00001d028930_P001 | Maize | nucleus | 33.98 | 36.61 |
| AT1G25340.3 | Thale cress | nucleus | 30.94 | 36.36 |
| Zm00001d009066_P001 | Maize | nucleus | 31.49 | 35.85 |
| Zm00001d048647_P001 | Maize | nucleus | 34.81 | 35.8 |
| Zm00001d024726_P001 | Maize | nucleus | 35.08 | 35.77 |
| Zm00001d048383_P001 | Maize | nucleus | 22.65 | 35.34 |
| Zm00001d027623_P001 | Maize | nucleus | 23.76 | 34.54 |
| Zm00001d030644_P001 | Maize | nucleus | 33.15 | 34.19 |
| Zm00001d030678_P001 | Maize | nucleus | 21.82 | 32.64 |
| Zm00001d024725_P001 | Maize | nucleus | 35.91 | 32.02 |
| Zm00001d048623_P002 | Maize | nucleus | 20.17 | 32.02 |
| Zm00001d041576_P001 | Maize | nucleus | 21.55 | 31.2 |
| Zm00001d017243_P001 | Maize | nucleus | 23.76 | 30.61 |
| Zm00001d044107_P001 | Maize | nucleus | 22.1 | 30.3 |
| Zm00001d025823_P001 | Maize | nucleus | 21.82 | 28.42 |
| Zm00001d051117_P001 | Maize | nucleus | 19.34 | 25.09 |
| Zm00001d035605_P001 | Maize | nucleus | 21.82 | 24.16 |
| Zm00001d035604_P001 | Maize | nucleus | 22.93 | 22.55 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100273260 | MapMan:15.5.2.1 | ProteinID:AQK90127.1 | UniProt:B4FU27 | EMBL:BT040615 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EMBL:HQ858681 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF510 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00017B8091 | EnsemblPlantsGene:Zm00001d008528 | EnsemblPlants:Zm00001d008528_P001 |
| EnsemblPlants:Zm00001d008528_T001 | SEG:seg | : | : | : | : |
Description
MYB-transcription factor 22myb domain protein 62
Coordinates
chr8:-:11883571..11885380
Molecular Weight (calculated)
39225.9 Da
IEP (calculated)
6.445
GRAVY (calculated)
-0.579
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQRKGAMAA AVTASKHRED QEAMMVELRR GPWTLEEDNL LMNYIACHGE GRWNLLARCS GLKRTGKSCR LRWLNYLKPD IKRGNLTPEE QLLILELHSK
101: WGNRWSRIAQ HLPGRTDNEI KNYWRTRVQK QARQLRVDAN SAVFRDAVRC YWMPRLLEKM AAHHHGDGEL PPPLHPSHNI AGTASSRSPP AHGSQQEDPS
201: SSAPAASGHY LQQVDPSPST STTSGSTTSA ALPPVPCFSE SELRWVVDQY GAAYGYTDDL DLDGGAGVVD DDSAAAAALD SLGLDGLDLG PADGGVYSDA
301: TLLDYLNATC AGGTTVMTMM GGVHGAAGGG DGDYGPSPWR TDELGQTARK LGDPQHQWRG GI
101: WGNRWSRIAQ HLPGRTDNEI KNYWRTRVQK QARQLRVDAN SAVFRDAVRC YWMPRLLEKM AAHHHGDGEL PPPLHPSHNI AGTASSRSPP AHGSQQEDPS
201: SSAPAASGHY LQQVDPSPST STTSGSTTSA ALPPVPCFSE SELRWVVDQY GAAYGYTDDL DLDGGAGVVD DDSAAAAALD SLGLDGLDLG PADGGVYSDA
301: TLLDYLNATC AGGTTVMTMM GGVHGAAGGG DGDYGPSPWR TDELGQTARK LGDPQHQWRG GI
001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
Arabidopsis Description
MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.