Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01143 | Sorghum | nucleus | 83.33 | 75.09 |
| KRG94092 | Soybean | nucleus | 21.97 | 65.17 |
| Solyc02g086690.2.1 | Tomato | nucleus | 21.59 | 60.64 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 47.35 | 58.69 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 46.59 | 58.02 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 45.08 | 56.67 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 45.45 | 56.07 |
| VIT_14s0066g01090.t01 | Wine grape | nucleus | 33.71 | 47.09 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 34.47 | 46.67 |
| Solyc02g067760.2.1 | Tomato | nucleus | 34.09 | 46.15 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 34.09 | 45.92 |
| Os01t0637800-00 | Rice | mitochondrion, nucleus, plastid | 48.11 | 45.68 |
| KRG94086 | Soybean | nucleus | 34.85 | 44.66 |
| KRH07188 | Soybean | nucleus | 34.85 | 44.23 |
| KRH56587 | Soybean | nucleus | 33.71 | 43.2 |
| KRG93265 | Soybean | nucleus | 33.33 | 42.93 |
| AT3G27810.1 | Thale cress | nucleus | 36.36 | 42.48 |
| AT5G40350.1 | Thale cress | nucleus | 34.09 | 42.06 |
| CDY37512 | Canola | nucleus | 31.44 | 41.29 |
| PGSC0003DMT400001278 | Potato | nucleus | 32.2 | 41.06 |
| Bra001005.1-P | Field mustard | nucleus | 31.82 | 40.38 |
| CDX74303 | Canola | nucleus | 31.82 | 40.38 |
| CDY00146 | Canola | nucleus | 25.38 | 40.36 |
| CDY49063 | Canola | nucleus | 31.44 | 40.1 |
| CDX91944 | Canola | nucleus | 31.44 | 40.1 |
| CDX86471 | Canola | nucleus | 35.23 | 40.09 |
| CDY20036 | Canola | nucleus | 35.23 | 40.09 |
| Bra039067.1-P | Field mustard | nucleus | 35.23 | 40.09 |
| Bra025300.1-P | Field mustard | nucleus | 35.23 | 40.09 |
| CDY44433 | Canola | nucleus | 35.23 | 40.09 |
| Bra039108.1-P | Field mustard | nucleus | 31.06 | 40.0 |
| AT3G01530.1 | Thale cress | nucleus | 30.68 | 39.32 |
| Zm00001d048623_P002 | Maize | nucleus | 28.41 | 32.89 |
| Zm00001d030678_P001 | Maize | nucleus | 29.92 | 32.64 |
| Zm00001d041576_P001 | Maize | nucleus | 29.92 | 31.6 |
| Zm00001d048383_P001 | Maize | nucleus | 27.27 | 31.03 |
| Zm00001d027623_P001 | Maize | nucleus | 28.03 | 29.72 |
| Zm00001d028930_P001 | Maize | nucleus | 36.74 | 28.87 |
| Zm00001d047579_P001 | Maize | nucleus | 37.12 | 28.08 |
| Zm00001d040594_P001 | Maize | nucleus | 31.06 | 27.06 |
| Zm00001d017243_P001 | Maize | nucleus | 28.79 | 27.05 |
| Zm00001d007191_P001 | Maize | nucleus | 34.09 | 25.94 |
| Zm00001d030644_P001 | Maize | nucleus | 34.47 | 25.93 |
| Zm00001d025823_P001 | Maize | nucleus | 27.27 | 25.9 |
| Zm00001d009066_P001 | Maize | nucleus | 31.06 | 25.79 |
| Zm00001d024726_P001 | Maize | nucleus | 34.09 | 25.35 |
| Zm00001d010933_P001 | Maize | nucleus | 35.23 | 25.34 |
| Zm00001d048647_P001 | Maize | nucleus | 33.71 | 25.28 |
| Zm00001d035605_P001 | Maize | nucleus | 30.68 | 24.77 |
| Zm00001d051117_P001 | Maize | nucleus | 24.24 | 22.94 |
| Zm00001d024725_P001 | Maize | nucleus | 35.23 | 22.91 |
| Zm00001d008528_P001 | Maize | nucleus | 30.3 | 22.1 |
| Zm00001d040019_P001 | Maize | nucleus | 29.92 | 21.82 |
| Zm00001d035604_P001 | Maize | nucleus | 30.3 | 21.74 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 39.39 | 8.27 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103651451 | MapMan:15.5.2.1 | UniProt:A0A060D8J7 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EMBL:KJ728193 | InterPro:Myb_dom |
| ProteinID:ONM39937.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF531 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000221209A | EnsemblPlantsGene:Zm00001d044107 | EnsemblPlants:Zm00001d044107_P001 | EnsemblPlants:Zm00001d044107_T001 |
| SEG:seg | : | : | : | : | : |
Description
MYB-transcription factor 53R2R3MYB-domain protein
Coordinates
chr3:-:219453611..219454543
Molecular Weight (calculated)
29265.8 Da
IEP (calculated)
6.863
GRAVY (calculated)
-0.689
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTSRVARSC GRGSDDEPAV RKGPWTLEED LILVSYISQH GEGSWDNLAR AAGLNRNGKS CRLRWLNYLR PGVRRGSITA GEDTVIRELH ARWGNKWSKI
101: SKHLPGRTDN EIKNYWRTRI QQKKQQGAKT TQQREPSTTA SSGAGDDYWC TKPDPDQQAH YCLQKAAMAA ATATTSAVVV SSEDDAPSAA LTSQDSSAAA
201: GGDWYMHQQQ MCYPYCSELS FVAAGHDETV GLDAVTMQFL SSHFTASFWT NGVDDFWESK PIDY
101: SKHLPGRTDN EIKNYWRTRI QQKKQQGAKT TQQREPSTTA SSGAGDDYWC TKPDPDQQAH YCLQKAAMAA ATATTSAVVV SSEDDAPSAA LTSQDSSAAA
201: GGDWYMHQQQ MCYPYCSELS FVAAGHDETV GLDAVTMQFL SSHFTASFWT NGVDDFWESK PIDY
001: MSNITKKKCN GNEEGAEQRK GPWTLEEDTL LTNYISHNGE GRWNLLAKSS GLKRAGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKISK
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
Arabidopsis Description
MYB116myb domain protein 116 [Source:TAIR;Acc:AT1G25340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.